RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 LONP2Q86WA8 852 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 SUDS3Q9H7L9 328 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 USP18Q9UMW8 372 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 TIMM13Q9Y5L4 95 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 TYW5A2RUC4 315 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 RIPK2O43353 540 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 PGM1P36871 562 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 COBLL1Q53SF7 1204 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 DENND5BQ6ZUT9 1274 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 NAALADL1Q9UQQ1 740 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 M0QYT0 321 aa17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 PIK3CDO00329 1044 aa17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 AKAP5P24588 427 aa17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 HASPINQ8TF76 798 aa17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 CPSF2Q9P2I0 782 aaKnown RBP17.21■□□□□ 0.34
PTPRN2-205ENST00000409483 CFAP73A6NFT4 308 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 KPNA7A9QM74 516 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 H3BRB1 525 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 PLSCR1O15162 318 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ETS1P14921 441 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 SSTR1P30872 391 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ZNF157P51786 506 aaPredicted RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 HUNKP57058 714 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ANO5Q75V66 913 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 EXD1Q8NHP7 514 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 IFT43Q96FT9 208 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 DCLK3Q9C098 648 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 SP110Q9HB58 689 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 EPS15L1Q9UBC2 864 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 SCOCQ9UIL1 159 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 MID2Q9UJV3 735 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 PCDHA3Q9Y5H8 950 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 UBA1P22314 1058 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 KPNA2P52292 529 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 GCNT1Q02742 428 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 YWHAHQ04917 246 aaPredicted RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 STX3Q13277 289 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 BMPR2Q13873 1038 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 NOTUMQ6P988 496 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ZNF669Q96BR6 464 aaPredicted RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ADCY3O60266 1144 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 COG7P83436 770 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 WDR49Q8IV35 697 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 PDZD8Q8NEN9 1154 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 SGF29Q96ES7 293 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 DDIT4Q9NX09 232 aa17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
PTPRN2-205ENST00000409483 ARHGEF37A1IGU5 675 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 PECAM1P16284 738 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 EPHB2P29323 1055 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 HSD17B4P51659 736 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 STILQ15468 1287 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 WHRNQ9P202 907 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 STOML1Q9UBI4 398 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 SNRPAP09012 282 aaKnown RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 PAMP19021 973 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ELF1P32519 619 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 TNFSF9P41273 254 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 CUL3Q13618 768 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 CCNG2Q16589 344 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ITPRIPL1Q6GPH6 555 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 IPMKQ8NFU5 416 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 LRRN4Q8WUT4 740 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 SNTG2Q9NY99 539 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 PHTF1Q9UMS5 762 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ACAT1P24752 427 aaKnown RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 KYAT1Q16773 422 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 BOLA3Q53S33 107 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 TMEM176AQ96HP8 235 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 Q9H521 79 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ADA2Q9NZK5 511 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 UBIAD1Q9Y5Z9 338 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 GLRA2P23416 452 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 SOX11P35716 441 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 NDST1P52848 882 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 SCUBE3Q8IX30 993 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 CEP120Q8N960 986 aa17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 ASCC2Q9H1I8 757 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-205ENST00000409483 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms