RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 UBE2TQ9NPD8 197 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SCHIP1Q9P0W5 487 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SHOC2Q9UQ13 582 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 INPP5FQ9Y2H2 1132 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 TGFB1I1O43294 461 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ITM2AO43736 263 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 BGNP21810 368 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ACAT1P24752 427 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 CPOXP36551 454 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ETV4P43268 484 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PHKA2P46019 1235 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ERFP50548 548 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 HIRAP54198 1017 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PFKPQ01813 784 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MECOMQ03112 1051 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 INAQ16352 499 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RNF111Q6ZNA4 994 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 STXBP4Q6ZWJ1 553 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 BRINP3Q76B58 766 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PCGF5Q86SE9 256 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 TTC13Q8NBP0 860 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MZB1Q8WU39 189 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 KCNN1Q92952 543 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 TTC17Q96AE7 1141 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MRRFQ96E11 262 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PAFAH2Q99487 392 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 CGREF1Q99674 301 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RABGEF1Q9UJ41 708 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 DCAF8L1A6NGE4 600 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 C2orf71A6NGG8 1288 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 TSHRP16473 764 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PAX3P23760 479 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RFC4P35249 363 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 BTKQ06187 659 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SEPT6Q14141 434 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 C16orf72Q14CZ0 275 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RABGAP1LQ5R372 815 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 POTEAQ6S8J7 498 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 KCTD17Q8N5Z5 321 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RAB3IL1Q8TBN0 382 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ACTRT2Q8TDY3 377 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SGF29Q96ES7 293 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PCDHB18PQ96TA0 734 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PRPF18Q99633 342 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 NUF2Q9BZD4 464 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 KLC2Q9H0B6 622 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PRDM16Q9HAZ2 1276 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 VAT1LQ9HCJ6 419 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 UBAP1Q9NZ09 502 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 COQ6Q9Y2Z9 468 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM170AA1A519 330 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 FUOMA2VDF0 154 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 CAPN8A6NHC0 703 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 GOLGA8TH3BQL2 631 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 H3BSA7 217 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PSTPIP1O43586 416 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MED24O75448 989 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 KLHL2O95198 593 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 EIF2S1P05198 315 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 USP17L8P0C7I0 530 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF23P17027 643 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 GYG1P46976 350 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 NEK2P51955 445 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 BFSP1Q12934 665 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ITGA7Q13683 1181 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MDH1BQ5I0G3 518 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 RC3H1Q5TC82 1133 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 MFSD4BQ5TF39 518 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 POTEGQ6S5H5 508 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 NANOGNBQ7Z5D8 188 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 EPS8L1Q8TE68 723 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 BORCS5Q969J3 196 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 CPVLQ9H3G5 476 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 STN1Q9H668 368 aaKnown RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ACSS3Q9H6R3 686 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SELENONQ9NZV5 590 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 CHORDC1Q9UHD1 332 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 PSMD13Q9UNM6 376 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 AP4B1Q9Y6B7 739 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SF3B1O75533 1304 aaKnown RBP eCLIP6.1□□□□□ -1.435e-6■■■■■ 88.5
R3HDM1-202ENST00000409478 SPATA31A5Q5VU36 1347 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SPATA31A6Q5VVP1 1343 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 SPATA31A7Q8IWB4 1347 aa6.1□□□□□ -1.43
R3HDM1-202ENST00000409478 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 PRR5-ARHGAP8B1AHC4 643 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CYP26A1O43174 497 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ADCY6O43306 1168 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 BAIAP3O94812 1187 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CRTAMO95727 393 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 POLR2MP0CAP2 368 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 OCM2P0CE71 109 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 OCMP0CE72 109 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 RALAP11233 206 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 HMOX2P30519 316 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 COPAP53621 1224 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms