RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 EIF2AK2P19525 551 aaKnown RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 MCL1Q07820 350 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 ALCAMQ13740 583 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 MORF4L2Q15014 288 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 CNPY1Q3B7I2 92 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 ACCSQ96QU6 501 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 NDNQ99608 321 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 TMEM120AQ9BXJ8 343 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 VPS11Q9H270 941 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 SPDYE16A6NNV3 312 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 IPO5O00410 1097 aaKnown RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 GAS7O60861 476 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 ARSEP51690 589 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 SH3BGRP55822 239 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 IZUMO2Q6UXV1 221 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 MCOLN2Q8IZK6 566 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 DDX50Q9BQ39 737 aaKnown RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 UBE2OQ9C0C9 1292 aaKnown RBP16.21■□□□□ 0.19
LIMS2-205ENST00000409455 KCNH7Q9NS40 1196 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 ZNF148Q9UQR1 794 aa16.21■□□□□ 0.19
LIMS2-205ENST00000409455 F8W8V4 182 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 PROSCO94903 275 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 RARBP10826 455 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 KRT5P13647 590 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 NEK3P51956 506 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 OAZ1P54368 228 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 GPS1Q13098 491 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-205ENST00000409455 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 KATNAL2Q8IYT4 538 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 SAMD3Q8N6K7 520 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 PLEKHO2Q8TD55 490 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 TMEM174Q8WUU8 243 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 OTUD5Q96G74 571 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 RMDN3Q96TC7 470 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 ALOX15BO15296 676 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 GJC1P36383 396 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 RAP1GDS1P52306 607 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 PDIA2Q13087 525 aaKnown RBP16.2■□□□□ 0.18
LIMS2-205ENST00000409455 EFHC2Q5JST6 749 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 CCDC110Q8TBZ0 833 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 NCSTNQ92542 709 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 SEMA4DQ92854 862 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 ALKBH8Q96BT7 664 aaKnown RBP16.2■□□□□ 0.18
LIMS2-205ENST00000409455 OLFM3Q96PB7 478 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 IL1RAPL1Q9NZN1 696 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 PKD2L1Q9P0L9 805 aa16.2■□□□□ 0.18
LIMS2-205ENST00000409455 RLFQ13129 1914 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 TGDSO95455 350 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 CD58P19256 250 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 AMPD1P23109 780 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 PHBP35232 272 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 CDK7P50613 346 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 PGM5Q15124 567 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 LIN52Q52LA3 116 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ZC3H12AQ5D1E8 599 aaKnown RBP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ARMC3Q5W041 872 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 KRT39Q6A163 491 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ANKRD13AQ8IZ07 590 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 DAW1Q8N136 415 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 HELQQ8TDG4 1101 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 TUBGCP5Q96RT8 1024 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 NDE1Q9NXR1 346 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 NDC80O14777 642 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 LIASO43766 372 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 PEX10O60683 326 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 MAGEC1O60732 1142 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 CIB2O75838 187 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ZSCAN5DPP0CG00 497 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 MYCLP12524 364 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 AP2B1P63010 937 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ZNF276Q8N554 614 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 GLIS1Q8NBF1 620 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ECSITQ9BQ95 431 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 LXNQ9BS40 222 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 ZWILCHQ9H900 591 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms