RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TRAF3IP3Q9Y228 551 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 RASA4BC9J798 803 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 FSCN2O14926 492 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 RASA4O43374 803 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 TYROBPO43914 113 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 OPHN1O60890 802 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SUPT3HO75486 399 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 TFAP2AP05549 437 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 ESRRAP11474 423 aaPredicted RBP11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 PRKCZQ05513 592 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 PRPF4BQ13523 1007 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 EPHA7Q15375 998 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 FAM26FQ5R3K3 315 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 GRAMD4Q6IC98 578 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 PACS1Q6VY07 963 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 CENPUQ71F23 418 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 ARMCX6Q7L4S7 300 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SRRM1Q8IYB3 904 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 FAM186BQ8IYM0 893 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 CYP4X1Q8N118 509 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 AHI1Q8N157 1196 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SCAIQ8N9R8 606 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 JADE3Q92613 823 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 CD101Q93033 1021 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 ALKBH8Q96BT7 664 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SIKE1Q9BRV8 207 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 KANSL3Q9P2N6 904 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC24A2Q9UI40 661 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 ALG6Q9Y672 507 aa11.16□□□□□ -0.62
NIF3L1-204ENST00000409357 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 TM9SF1O15321 606 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 THAP12O43422 761 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 ETS2P15036 469 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 RFX1P22670 979 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 S100A1P23297 94 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 CDK8P49336 464 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 ARID5AQ03989 594 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 KIF22Q14807 665 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC142Q17RM4 750 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 KLHL35Q6PF15 583 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 KLHDC10Q6PID8 442 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 PATL1Q86TB9 770 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 RASSF3Q86WH2 238 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 UHMK1Q8TAS1 419 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 HPS3Q969F9 1004 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 ARMC5Q96C12 935 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 SGF29Q96ES7 293 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 P2RX7Q99572 595 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 PLVAPQ9BX97 442 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 STK33Q9BYT3 514 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 KLHL4Q9C0H6 718 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 SIX2Q9NPC8 291 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 SRRDQ9UH36 339 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 EFR3BQ9Y2G0 817 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 MYPNQ86TC9 1320 aa11.15□□□□□ -0.62
NIF3L1-204ENST00000409357 hCG_1642624A0A1W2PR95 340 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 SPAG7O75391 227 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 PDE5AO76074 875 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 STK10O94804 968 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 ACSL3O95573 720 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 SOX5P35711 763 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 VPS41P49754 854 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 COASYQ13057 564 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 PDK3Q15120 406 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 FAM110CQ1W6H9 321 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 DHDDSQ86SQ9 333 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 RSPH3Q86UC2 560 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 SIAH1Q8IUQ4 282 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 ZDHHC14Q8IZN3 488 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 DEPTORQ8TB45 409 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 DTX3LQ8TDB6 740 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 TCHPQ9BT92 498 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 EBF3Q9H4W6 596 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms