RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 HOXA9P31269 272 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 USP8P40818 1118 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 KLHL30Q0D2K2 578 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 HGSNATQ68CP4 663 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 CYP26C1Q6V0L0 522 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 ACOT1Q86TX2 421 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 TCEAL8Q8IYN2 117 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 CCDC170Q8IYT3 715 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 ZNF606Q8WXB4 792 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 PCED1BQ96HM7 432 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
LIMS2-203ENST00000409254 MIS12Q9H081 205 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 PLEKHA4Q9H4M7 779 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 HESX1Q9UBX0 185 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 MTUS1Q9ULD2 1270 aa13.82□□□□□ -0.2
LIMS2-203ENST00000409254 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 RNF225M0QZC1 329 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 TRIM66O15016 1216 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 THAP12O43422 761 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 NCK2O43639 380 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 PDGFRBP09619 1106 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 GZMAP12544 262 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 CD19P15391 556 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 NPR3P17342 541 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 OR1D2P34982 312 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 TUFMP49411 452 aaKnown RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 SNX16P57768 344 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 ERVFC1P60507 584 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 BST2Q10589 180 aaKnown RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 PLD1Q13393 1074 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 SLC39A12Q504Y0 691 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 PKDCCQ504Y2 493 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 MDH1BQ5I0G3 518 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 E4F1Q66K89 784 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 WDR59Q6PJI9 974 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 PRSS55Q6UWB4 352 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 FAM35AQ86V20 835 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 TMTC1Q8IUR5 882 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 SPATA2LQ8IUW3 424 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 FUKQ8N0W3 1084 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 MSANTD4Q8NCY6 345 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 GDPD5Q8WTR4 605 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 NOX5Q96PH1 765 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 RHOBTB2Q9BYZ6 727 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 DMAP1Q9NPF5 467 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-203ENST00000409254 EHD2Q9NZN4 543 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
LIMS2-203ENST00000409254 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 HELZP42694 1942 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 C2CD2LO14523 706 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 XPO1O14980 1071 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 GLUD1P00367 558 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 ACAT1P24752 427 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 PSMC1P62191 440 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 PTPN21Q16825 1174 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 TDRD12Q587J7 1177 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 PLPP4Q5VZY2 271 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 SPRED2Q7Z698 418 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 SCML4Q8N228 414 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 TMEM35BQ8NCS4 154 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 CPLX3Q8WVH0 158 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 MYLPFQ96A32 169 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 B3GALT6Q96L58 329 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 C8orf48Q96LL4 319 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
LIMS2-203ENST00000409254 COMMD8Q9NX08 183 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 DOCK6Q96HP0 2047 aa13.8□□□□□ -0.2
LIMS2-203ENST00000409254 EPOPA6NHQ4 379 aa13.79□□□□□ -0.2
LIMS2-203ENST00000409254 CYP1A1P04798 512 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 PNMA6AP0CW24 399 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
LIMS2-203ENST00000409254 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 ACADSBP45954 432 aa13.79□□□□□ -0.2
LIMS2-203ENST00000409254 PLA2G4AP47712 749 aa13.79□□□□□ -0.2
LIMS2-203ENST00000409254 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 CLCN4P51793 760 aa13.79□□□□□ -0.2
LIMS2-203ENST00000409254 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 GSCP56915 257 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-203ENST00000409254 FMO1Q01740 532 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms