RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 OPRD1P41143 372 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 GPR15P49685 360 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 ENOX2Q16206 610 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 LYSMD4Q5XG99 296 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 HDDC3Q8N4P3 179 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 CCDC33Q8N5R6 958 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 TMEM161BQ8NDZ6 487 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 C17orf75Q9HAS0 396 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 PILRBQ9UKJ0 227 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 FAM189A1O60320 539 aa13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 ITPKAP23677 461 aa13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 MATR3P43243 847 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 GAB4Q2WGN9 574 aa13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 EFCAB13Q8IY85 973 aa13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 CCDC26Q8TAB7 109 aa13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 NTPCRQ9BSD7 190 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-203ENST00000409219 ANO9A1A5B4 782 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 OPHN1O60890 802 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 ADRB2P07550 413 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 MAPTP10636 758 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 CD59P13987 128 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 DPP6P42658 865 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 ZNF174Q15697 407 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 SDHAF4Q5VUM1 108 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 JADE1Q6IE81 842 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 RINT1Q6NUQ1 792 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 MINDY1Q8N5J2 469 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 OR2I1PQ8NGU4 316 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 MDM1Q8TC05 714 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 SNX29Q8TEQ0 813 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 WHAMMQ8TF30 809 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 BACH2Q9BYV9 841 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 CCDC86Q9H6F5 360 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 SLC6A14Q9UN76 642 aa13.88□□□□□ -0.19
CHRNA1-203ENST00000409219 PIRO00625 290 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 MAP3K13O43283 966 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 ALDH1A2O94788 518 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 CKMP06732 381 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 CSH1P0DML2 217 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 CSH2P0DML3 217 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 HOXD12P35452 270 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 RAD51AP2Q09MP3 1159 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 NR1H3Q13133 447 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 MAP7D1Q3KQU3 841 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 SPDYCQ5MJ68 293 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 SFTPA1Q8IWL2 248 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 ALLCQ8N6M5 410 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 HNRNPLLQ8WVV9 542 aaKnown RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 ADAMTS14Q8WXS8 1223 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 TMLHEQ9NVH6 421 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 DSEQ9UL01 958 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 PTPRBP23467 1997 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 SGK1O00141 431 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 JAK2O60674 1132 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 NFICP08651 508 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 SERPINF2P08697 491 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 USP17L7P0C7H9 530 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 PLS3P13797 630 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 PAX3P23760 479 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 MRPS21P82921 87 aaKnown RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 MESP2Q0VG99 397 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 TRIM29Q14134 588 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 DUOXA1Q1HG43 343 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 WSCD1Q658N2 575 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 IGSF22Q8N9C0 903 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 IL17RCQ8NAC3 791 aa13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
CHRNA1-203ENST00000409219 ADAM32Q8TC27 787 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms