RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TLR10Q9BXR5 811 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 AMFRQ9UKV5 643 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 TDRD15B5MCY1 1934 aaKnown RBP22.24■■□□□ 1.15
TPM1-208ENST00000404484 CASTOR2A6NHX0 329 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 MICAL2O94851 1124 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 CKAP4Q07065 602 aaKnown RBP22.24■■□□□ 1.15
TPM1-208ENST00000404484 ORC1Q13415 861 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 RPS6KA1Q15418 735 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 NOMO2Q5JPE7 1267 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 DENND1BQ6P3S1 775 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 MMS22LQ6ZRQ5 1243 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 SPRED2Q7Z698 418 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 ERICH1Q86X53 443 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 KBTBD7Q8WVZ9 684 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 LCMT1Q9UIC8 334 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 COG5Q9UP83 839 aa22.24■■□□□ 1.15
TPM1-208ENST00000404484 UQCRHLA0A096LP55 91 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 M0QYV0 167 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 ATMINO43313 823 aaPredicted RBP22.23■■□□□ 1.15
TPM1-208ENST00000404484 HOXA2O43364 376 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 UQCRHP07919 91 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 RRM1P23921 792 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 SSTR3P32745 418 aaPredicted RBP22.23■■□□□ 1.15
TPM1-208ENST00000404484 AARSP49588 968 aaKnown RBP eCLIP22.23■■□□□ 1.15
TPM1-208ENST00000404484 DSTYKQ6XUX3 929 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 CRYBG2Q8N1P7 616 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 PDCL2Q8N4E4 241 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 SENP8Q96LD8 212 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 MIS12Q9H081 205 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 PRDM12Q9H4Q4 367 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 CERS4Q9HA82 394 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 PARVAQ9NVD7 372 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 STXBP5LQ9Y2K9 1186 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 PCDHB7Q9Y5E2 793 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 EYSQ5T1H1 3165 aa22.23■■□□□ 1.15
TPM1-208ENST00000404484 LHX1P48742 406 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 PTP4A2Q12974 167 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 ARHGAP17Q68EM7 881 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 ACOT1Q86TX2 421 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 ABI1Q8IZP0 508 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 MYLIPQ8WY64 445 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 OSBPL9Q96SU4 736 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 YME1L1Q96TA2 773 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 CARD6Q9BX69 1037 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 ABCB6Q9NP58 842 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 HESX1Q9UBX0 185 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 LRFN2Q9ULH4 789 aa22.22■■□□□ 1.15
TPM1-208ENST00000404484 FAM170AA1A519 330 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 CES2O00748 559 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 KIF4AO95239 1232 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 SETSIPP0DME0 302 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 ODC1P11926 461 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 CLLU1OSQ5K130 101 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 PLEKHA7Q6IQ23 1121 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 DCLRE1AQ6PJP8 1040 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 NT5DC3Q86UY8 548 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 WDR35Q9P2L0 1181 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 RNF14Q9UBS8 474 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 TSPAN16Q9UKR8 245 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 LINC01553A4QN01 128 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 NCK2O43639 380 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 FGFR1P11362 822 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 SNX16P57768 344 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 TUBB4BP68371 445 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 GOLGA7BQ2TAP0 167 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 WDTC1Q8N5D0 677 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 SP7Q8TDD2 431 aaPredicted RBP22.21■■□□□ 1.15
TPM1-208ENST00000404484 IPO4Q8TEX9 1081 aaKnown RBP22.21■■□□□ 1.15
TPM1-208ENST00000404484 DSEQ9UL01 958 aa22.21■■□□□ 1.15
TPM1-208ENST00000404484 MIF4GDA9UHW6 222 aaKnown RBP22.2■■□□□ 1.14
TPM1-208ENST00000404484 GABRDO14764 452 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 CTIFO43310 598 aaKnown RBP22.2■■□□□ 1.14
TPM1-208ENST00000404484 B3GAT3O94766 335 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 DNAJC24Q6P3W2 148 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 METTL23Q86XA0 190 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 RPGRIP1Q96KN7 1286 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 FAM193BQ96PV7 902 aaPredicted RBP22.2■■□□□ 1.14
TPM1-208ENST00000404484 SYNCQ9H7C4 482 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 ANAPC7Q9UJX3 599 aa22.2■■□□□ 1.14
TPM1-208ENST00000404484 EPOPA6NHQ4 379 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 DGKIO75912 1065 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 GPD2P43304 727 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 GSCP56915 257 aaPredicted RBP22.19■■□□□ 1.14
TPM1-208ENST00000404484 RNASELQ05823 741 aaKnown RBP22.19■■□□□ 1.14
TPM1-208ENST00000404484 DSC1Q08554 894 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 MESDQ14696 234 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 WSCD1Q658N2 575 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 NPAS4Q8IUM7 802 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 C12orf29Q8N999 325 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 C3orf58Q8NDZ4 430 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 ZNF689Q96CS4 500 aaPredicted RBP22.19■■□□□ 1.14
TPM1-208ENST00000404484 HES6Q96HZ4 224 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 PBKQ96KB5 322 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 RC3H2Q9HBD1 1191 aaKnown RBP22.19■■□□□ 1.14
TPM1-208ENST00000404484 ALG6Q9Y672 507 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 PRUNE2Q8WUY3 3088 aa22.19■■□□□ 1.14
TPM1-208ENST00000404484 CTAGE15A4D2H0 777 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 EFCAB8A8MWE9 144 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 MYO1FO00160 1098 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 RFXAPO00287 272 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms