RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 NR1H3Q13133 447 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 MYBPC2Q14324 1141 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 ARMCX5Q6P1M9 558 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 TOGARAM2Q6ZUX3 1019 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 FBXL16Q8N461 479 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 FRMD1Q8N878 549 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 LSM14AQ8ND56 463 aaKnown RBP10.08□□□□□ -0.8
NUP43-204ENST00000403890 OR2I1PQ8NGU4 316 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 CRELD1Q96HD1 420 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 LPIN3Q9BQK8 851 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 CDT1Q9H211 546 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
NUP43-204ENST00000403890 DUS2Q9NX74 493 aaKnown RBP10.08□□□□□ -0.8
NUP43-204ENST00000403890 KNTC1P50748 2209 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 J3QKU1 62 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 K7EQS6 105 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 LARGE1O95461 756 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 SYPP08247 313 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 CYP11B2P19099 503 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 PDIA3P30101 505 aaKnown RBP10.07□□□□□ -0.8
NUP43-204ENST00000403890 SEC13P55735 322 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 ZNF568Q3ZCX4 644 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 OVOS1Q6IE37 1185 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 ZNF843Q8N446 348 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 IFT74Q96LB3 600 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 SEPT5Q99719 369 aaPredicted RBP10.07□□□□□ -0.8
NUP43-204ENST00000403890 ACO2Q99798 780 aaKnown RBP10.07□□□□□ -0.8
NUP43-204ENST00000403890 KIFC3Q9BVG8 833 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 TTC12Q9H892 705 aaPredicted RBP10.07□□□□□ -0.8
NUP43-204ENST00000403890 PTPRHQ9HD43 1115 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 KIAA1522Q9P206 1035 aaPredicted RBP10.07□□□□□ -0.8
NUP43-204ENST00000403890 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
NUP43-204ENST00000403890 TRABD2BA6NFA1 517 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 AP5Z1O43299 807 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
NUP43-204ENST00000403890 F11P03951 625 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 HNRNPLP14866 589 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP43-204ENST00000403890 ABCG1P45844 678 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
NUP43-204ENST00000403890 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
NUP43-204ENST00000403890 MTF1Q14872 753 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 MGAT5BQ3V5L5 792 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 TXNDC8Q6A555 127 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 DSTYKQ6XUX3 929 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 TMPRSS7Q7RTY8 843 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 GLRX5Q86SX6 157 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 TMEM150AQ86TG1 271 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 SLCO6A1Q86UG4 719 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 MON1AQ86VX9 555 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 LURAP1LQ8IV03 231 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 NAXDQ8IW45 347 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 TCHPQ9BT92 498 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 AGXT2Q9BYV1 514 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
NUP43-204ENST00000403890 BCCIPQ9P287 314 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP43-204ENST00000403890 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 CPLX1O14810 134 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 GJB3O75712 270 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 MCF2P10911 925 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 ATF6P18850 670 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 TYMPP19971 482 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
NUP43-204ENST00000403890 IFNAR2P48551 515 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUP43-204ENST00000403890 EVCP57679 992 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 NLRP12P59046 1061 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
NUP43-204ENST00000403890 DMP1Q13316 513 aaPredicted RBP10.05□□□□□ -0.8
NUP43-204ENST00000403890 CALCRLQ16602 461 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 SLC36A4Q6YBV0 504 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 CATSPER3Q86XQ3 398 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 PGBD3Q8N328 593 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 TTC16Q8NEE8 873 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 MRPS31Q92665 395 aaKnown RBP10.05□□□□□ -0.8
NUP43-204ENST00000403890 KIF2CQ99661 725 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 TUFT1Q9NNX1 390 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 TUBGCP4Q9UGJ1 667 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
NUP43-204ENST00000403890 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
NUP43-204ENST00000403890 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
NUP43-204ENST00000403890 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
NUP43-204ENST00000403890 CAPN8A6NHC0 703 aa10.04□□□□□ -0.8
NUP43-204ENST00000403890 CAPN9O14815 690 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms