RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 ALOX15BO15296 676 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 BGNP21810 368 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 SERPINB3P29508 390 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 YWHAGP61981 247 aaKnown RBP eCLIP12.58□□□□□ -0.4
RBM39-206ENST00000403542 IRX4P78413 519 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 CXCL9Q07325 125 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 KHDC1Q4VXA5 237 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 NBPF12Q5TAG4 269 aaPredicted RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 CAPRIN2Q6IMN6 1127 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 TRIM50Q86XT4 487 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 RFX6Q8HWS3 928 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 SLC7A3Q8WY07 619 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 GRAMD1AQ96CP6 724 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 OSBPL1AQ9BXW6 950 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 LRMDAQ9H2I8 198 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 RNPEPL1Q9HAU8 725 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 XPO7Q9UIA9 1087 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 ZC3H11AO75152 810 aaKnown RBP eCLIP12.57□□□□□ -0.43e-13■■■■□ 20.9
RBM39-206ENST00000403542 STAM2O75886 525 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
RBM39-206ENST00000403542 LMNB2Q03252 620 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 MORF4L2Q15014 288 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 FYB2Q5VWT5 728 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 CLNKQ7Z7G1 428 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 ARFGAP1Q8N6T3 406 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 TMEM174Q8WUU8 243 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 DCTN3O75935 186 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 TPBGLP0DKB5 382 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 TUBP50607 506 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 TRPC3Q13507 836 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 ACVR2BQ13705 512 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 CCDC6Q16204 474 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 PTPN20Q4JDL3 420 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
RBM39-206ENST00000403542 SLC13A1Q9BZW2 595 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 PDLIM7Q9NR12 457 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 ZNRF3Q9ULT6 936 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
RBM39-206ENST00000403542 ACTL7BQ9Y614 415 aa12.57□□□□□ -0.4
RBM39-206ENST00000403542 PRPF4O43172 522 aaKnown RBP eCLIP12.56□□□□□ -0.4
RBM39-206ENST00000403542 PYGBP11216 843 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 KRT3P12035 628 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 CALB2P22676 271 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 PSMC1P62191 440 aaKnown RBP12.56□□□□□ -0.4
RBM39-206ENST00000403542 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 ABHD15Q6UXT9 468 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 KCTD6Q8NC69 237 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 ZNF302Q9NR11 478 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 LPXNO60711 386 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 LRCH4O75427 683 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
RBM39-206ENST00000403542 ABHD2P08910 425 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 ELK3P41970 407 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 BMPR2Q13873 1038 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 TMEM132BQ14DG7 1078 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 KBTBD12Q3ZCT8 623 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 XKR3Q5GH77 459 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 TMEM35BQ8NCS4 154 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 CGRRF1Q99675 332 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 MANSC1Q9H8J5 431 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 CYP39A1Q9NYL5 469 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
RBM39-206ENST00000403542 CNTNAP2Q9UHC6 1331 aa12.56□□□□□ -0.4
RBM39-206ENST00000403542 A0A0B4J269 797 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 KRT36O76013 467 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 MT-ND3P03897 115 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 ARL4CP56559 192 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 SLC8A3P57103 927 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 CAPSQ13938 189 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 RCN2Q14257 317 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 KPNB1Q14974 876 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 MUM1Q2TAK8 710 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TRIM72Q6ZMU5 477 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 TMEM192Q8IY95 271 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 MAB21L3Q8N8X9 362 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PRPF31Q8WWY3 499 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 LPAR1Q92633 364 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 ASCC2Q9H1I8 757 aaPredicted RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 HMGXB4Q9UGU5 601 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 IKBKGQ9Y6K9 419 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 KBTBD13C9JR72 458 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 E5RJQ4 531 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 MAP3K13O43283 966 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 KIF1CO43896 1103 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms