RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 EFCAB6Q5THR3 1501 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 GUCY1A2P33402 732 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 CNGA2Q16280 664 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 LUZP2Q86TE4 346 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 RFFLQ8WZ73 363 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 SENP7Q9BQF6 1050 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 FAM167BQ9BTA0 163 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 LARGE1O95461 756 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 PCSK1P29120 753 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 STRIP1Q5VSL9 837 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 ALG13Q9NP73 1137 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 SCN3BQ9NY72 215 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
CACNA1C-215ENST00000399637 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ALDH2P05091 517 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 USP11P51784 963 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 C6orf10Q5SRN2 563 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 CALML6Q8TD86 181 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ACSF2Q96CM8 615 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ARHGEF26Q96DR7 871 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 TRABDQ9H4I3 376 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ADAM21Q9UKJ8 722 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 PDHXO00330 501 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 CYP26A1O43174 497 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 TLL1O43897 1013 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 NMT2O60551 498 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 KRT33AO76009 404 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 EPHA7Q15375 998 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SYCP2LQ5T4T6 812 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 PRUNE1Q86TP1 453 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 C18orf8Q96DM3 657 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 HSPBP1Q9NZL4 362 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SAE1Q9UBE0 346 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 TOMM70O94826 608 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 MTFR1Q15390 333 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 ATL2Q8NHH9 583 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 FBXO32Q969P5 355 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 DDX47Q9H0S4 455 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 TEX33O43247 280 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 AGBL1Q96MI9 1066 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 OMDQ99983 421 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 FYNP06241 537 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 CLUP10909 449 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
CACNA1C-215ENST00000399637 SCP2P22307 547 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 GYS2P54840 703 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 KCNK10P57789 538 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 KDSRQ06136 332 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 QRICH1Q2TAL8 776 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 SGO1Q5FBB7 561 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 COLEC12Q5KU26 742 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 RIC8BQ9NVN3 520 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 IL18RAPO95256 599 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 NUDT14O95848 222 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 GRK3P35626 688 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 STX3Q13277 289 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 E2F4Q16254 413 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 DNAL1Q4LDG9 190 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 UGT3A1Q6NUS8 523 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 HERC6Q8IVU3 1022 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 PRPF18Q99633 342 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 LRRC14BA6NHZ5 514 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 EYA4O95677 639 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 CASP1P29466 404 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ACADSBP45954 432 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ALDH6A1Q02252 535 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 CDC16Q13042 620 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 IKBKEQ14164 716 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms