RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 NECTIN4Q96NY8 510 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 NT5C1AQ9BXI3 368 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 VPS16Q9H269 839 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 ABI2Q9NYB9 513 aaPredicted RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 FAM50BQ9Y247 325 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 DOCK8Q8NF50 2099 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 C5orf42Q9H799 3197 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 HELZP42694 1942 aaKnown RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 LGALS16A8MUM7 142 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 XYLBO75191 536 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 TPM2P07951 284 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 BMP1P13497 986 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 IL9P15248 144 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ATF6P18850 670 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CD58P19256 250 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 TRIM21P19474 475 aaKnown RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CDK11BP21127 795 aaKnown RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 KCNQ1P51787 676 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 RAD23BP54727 409 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 TWF1Q12792 350 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CBX2Q14781 532 aaPredicted RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ATAT1Q5SQI0 421 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ACOT1Q86TX2 421 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 LUZP1Q86V48 1076 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 KAT5Q92993 513 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CEP295NLQ96MC4 621 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 TSPY26PQ9H489 355 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 AVENQ9NQS1 362 aaPredicted RBP11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CEP72Q9P209 647 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CDH22Q9UJ99 828 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
CYCSP55-201ENST00000399027 CCL16O15467 120 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 CYP2F1P24903 491 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 ALDH1A3P47895 512 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 EPHB3P54753 998 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 EPHA5P54756 1037 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 CYP27A1Q02318 531 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 MGAT5BQ3V5L5 792 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 PSMG2Q969U7 264 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 ERGIC2Q96RQ1 377 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 HNRNPABQ99729 332 aaKnown RBP11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 POMKQ9H5K3 350 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 WDR6Q9NNW5 1121 aaKnown RBP11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 UBE2TQ9NPD8 197 aaPredicted RBP11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 PLCB1Q9NQ66 1216 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 PRKAG3Q9UGI9 489 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 ASB3Q9Y575 518 aa11.11□□□□□ -0.63
CYCSP55-201ENST00000399027 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 CLUHO75153 1309 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 PES1O00541 588 aaKnown RBP11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 TRIM66O15016 1216 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 SOAT2O75908 522 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 PAEPP09466 180 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 PTPN2P17706 415 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 RFX1P22670 979 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 BDNFP23560 247 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ZNF132P52740 706 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 MFAP3P55082 362 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 RPL10AP62906 217 aaKnown RBP11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 TPM4P67936 248 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 APBA1Q02410 837 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ORC1Q13415 861 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ZNF394Q53GI3 561 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 FKBP15Q5T1M5 1219 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 GJB7Q6PEY0 223 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 FAM35AQ86V20 835 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 ELMOD1Q8N336 334 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 LEMD2Q8NC56 503 aa11.1□□□□□ -0.63
CYCSP55-201ENST00000399027 CYFIP2Q96F07 1278 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms