RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 EGFRP00533 1210 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 FKBP9P1Q75LS8 142 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ADGRA1Q86SQ6 560 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 RSAD1Q9HA92 442 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 TCN1P20061 433 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 PTPN7P35236 360 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 SLC2A3P11169 496 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 PTGER2P43116 358 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.524e-6■■■□□ 18.4
TTC28-201ENST00000397906 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 CLEC16AQ2KHT3 1053 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ZNF280DQ6N043 979 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 SNX5Q9Y5X3 404 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ATP8B1O43520 1251 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 COMTP21964 271 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 V9GYQ6 96 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 GUCY2CP25092 1073 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 C9orf72Q96LT7 481 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ASCC2Q9H1I8 757 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 TRABDQ9H4I3 376 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 WWOXQ9NZC7 414 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 SLC30A10Q6XR72 485 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ZNF614Q8N883 585 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 GAS2O43903 313 aaKnown RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 CXCL8P10145 99 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 INSRRP14616 1297 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 NPTX2P47972 431 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 MFSD10Q14728 455 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 CBWD2Q8IUF1 395 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 GPC2Q8N158 579 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 ARHGAP26Q9UNA1 814 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
TTC28-201ENST00000397906 KRT87PA6NCN2 255 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 POLE2P56282 527 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PTK7Q13308 1070 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ATXN3LQ9H3M9 355 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 OGTO15294 1046 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PGM5Q15124 567 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ECT2Q9H8V3 914 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 RHOAP61586 193 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 TMED1Q13445 227 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PCNX4Q63HM2 1172 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 MEGF6O75095 1541 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 AMHP03971 560 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ERVK-10P10266 1014 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 MROH9Q5TGP6 573 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PWP1Q13610 501 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 MRPL40Q9NQ50 206 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 AGPAT3Q9NRZ7 376 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 FAM32AQ9Y421 112 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 KDM1AO60341 852 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 FEZF2Q8TBJ5 459 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ABTB1Q969K4 478 aaPredicted RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 SGF29Q96ES7 293 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 TSEN34Q9BSV6 310 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 GPATCH2LQ9NWQ4 482 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 DDX43Q9NXZ2 648 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 RPL10AP62906 217 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 LAMB3Q13751 1172 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 EDEM1Q92611 657 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 FBXO10Q9UK96 956 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
TTC28-201ENST00000397906 OXCT1P55809 520 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PLIN5Q00G26 463 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 POU4F1Q01851 419 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 C3orf62Q6ZUJ4 267 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 TMX2Q9Y320 296 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 DGKIO75912 1065 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 PRAMEF19Q5SWL8 479 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 CALML6Q8TD86 181 aa11.81□□□□□ -0.52
TTC28-201ENST00000397906 SGPL1O95470 568 aa11.8□□□□□ -0.52
TTC28-201ENST00000397906 ITIH5Q86UX2 942 aa11.8□□□□□ -0.52
TTC28-201ENST00000397906 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
TTC28-201ENST00000397906 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
TTC28-201ENST00000397906 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
TTC28-201ENST00000397906 RHOCP08134 193 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms