RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 USP37Q86T82 979 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 ITIH5Q86UX2 942 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 DAW1Q8N136 415 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 CPA6Q8N4T0 437 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 CCDC33Q8N5R6 958 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 DEFB119Q8N690 84 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 FAM181AQ8N9Y4 354 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 ATAD1Q8NBU5 361 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 CCDC26Q8TAB7 109 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 OLIG1Q8TAK6 271 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 WHAMMQ8TF30 809 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-203ENST00000397378 C17orf75Q9HAS0 396 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 KMT5AQ9NQR1 393 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TUBGCP4Q9UGJ1 667 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TBX20Q9UMR3 447 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TIMM13Q9Y5L4 95 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-203ENST00000397378 PLXND1Q9Y4D7 1925 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 MYO18AQ92614 2054 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 FAM149AA5PLN7 773 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 AP5Z1O43299 807 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 CYP3A5P20815 502 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 CDC25CP30307 473 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 AVPR1AP37288 418 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.771e-18■□□□□ 8.2
NEDD9-203ENST00000397378 RPL6Q02878 288 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 BYSLQ13895 437 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 NBR1Q14596 966 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 CRY1Q16526 586 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 TAF1BQ53T94 588 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 SPDYCQ5MJ68 293 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 OVOS1Q6IE37 1185 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 GALNT15Q8N3T1 639 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 TTC9BQ8N6N2 239 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 TTC16Q8NEE8 873 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 USP33Q8TEY7 942 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 GTF3C6Q969F1 213 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 DRC1Q96MC2 740 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 PNMA5Q96PV4 448 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 KIF2CQ99661 725 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 NTPCRQ9BSD7 190 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 SLC46A2Q9BY10 475 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 IL21Q9HBE4 155 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 KIAA1522Q9P206 1035 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 UBQLN1Q9UMX0 589 aaKnown RBP10.21□□□□□ -0.77
NEDD9-203ENST00000397378 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 CCL26Q9Y258 94 aa10.21□□□□□ -0.77
NEDD9-203ENST00000397378 HELZP42694 1942 aaKnown RBP10.21□□□□□ -0.78
NEDD9-203ENST00000397378 TEX51A0A1B0GUA7 166 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 XPOTO43592 962 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 HIP1RO75146 1068 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 SOAT2O75908 522 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 LARGE1O95461 756 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 CXCL8P10145 99 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 PAX3P23760 479 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 TUFMP49411 452 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 MCL1Q07820 350 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 MAPK7Q13164 816 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 PDIA5Q14554 519 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 PDGFRLQ15198 375 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 ARMCX5Q6P1M9 558 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 ZPBP2Q6X784 338 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 GPR155Q7Z3F1 870 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 GLRX5Q86SX6 157 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 CFAP46Q8IYW2 2715 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 CMTM8Q8IZV2 173 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 PDCD7Q8N8D1 485 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 NECAB1Q8N987 351 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 SETD7Q8WTS6 366 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 TSPAN18Q96SJ8 248 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 ECT2Q9H8V3 914 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 DDX19AQ9NUU7 478 aaKnown RBP10.2□□□□□ -0.78
NEDD9-203ENST00000397378 KCNG1Q9UIX4 513 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 PCOLCE2Q9UKZ9 415 aa10.2□□□□□ -0.78
NEDD9-203ENST00000397378 SLC16A4O15374 487 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 CLDN3O15551 220 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 RRP8O43159 456 aaKnown RBP10.19□□□□□ -0.78
NEDD9-203ENST00000397378 GJB3O75712 270 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 WISP1O95388 367 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 NTRK1P04629 796 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 CYP11A1P05108 521 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 CLTAP09496 248 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 ATF6P18850 670 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 DDX6P26196 483 aaKnown RBP eCLIP10.19□□□□□ -0.781e-28■□□□□ 9.5
NEDD9-203ENST00000397378 LILRA4P59901 499 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 ZNF33AQ06730 810 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 STRN3Q13033 797 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 CAMK2BQ13554 666 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 VEPH1Q14D04 833 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■□ 20.1
NEDD9-203ENST00000397378 ZNF174Q15697 407 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 TAF12Q16514 161 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms