RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TRIM68Q6AZZ1 485 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 SLC35B2Q8TB61 432 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 BTBD10Q9BSF8 475 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 MMADHCQ9H3L0 296 aaPredicted RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 NPHS2Q9NP85 383 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 ASB3Q9Y575 518 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 STBD1O95210 358 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 VNN1O95497 513 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 DHRS4L1P0CG22 281 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ADRA1DP25100 572 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 GNA15P30679 374 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ABCD1P33897 745 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 VHLP40337 213 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KLC1Q07866 573 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 IRGCQ6NXR0 463 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 CHSY1Q86X52 802 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ERO1BQ86YB8 467 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 MAF1Q9H063 256 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ACSS3Q9H6R3 686 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ARHGAP28Q9P2N2 729 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 USTQ9Y2C2 406 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 LRRD1A4D1F6 860 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 PI4K2BG5E9Z4 385 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 IRF6O14896 467 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 HNRNPDLO14979 420 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 GSC2O15499 205 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ATP9AO75110 1047 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KRT1P04264 644 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 TCF4P15884 667 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 GLRA2P23416 452 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 PHBP35232 272 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 CDKN2BP42772 138 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 RPL7AP62424 266 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KLHL38Q2WGJ6 581 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KAZNQ674X7 775 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 NIPA2Q8N8Q9 360 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 ATP11CQ8NB49 1132 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 RFWD2Q8NHY2 731 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 IFT43Q96FT9 208 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 SYT15Q9BQS2 421 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 WDR83Q9BRX9 315 aaKnown RBP13.99□□□□□ -0.17
TRIM40-207ENST00000396581 TEX13BQ9BXU2 312 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 KCNK13Q9HB14 408 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 NMRK1Q9NWW6 199 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 IVNS1ABPQ9Y6Y0 642 aa13.99□□□□□ -0.17
TRIM40-207ENST00000396581 EME2A4GXA9 379 aaPredicted RBP13.98□□□□□ -0.17
TRIM40-207ENST00000396581 CXCL11O14625 94 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 NVLO15381 856 aaKnown RBP13.98□□□□□ -0.17
TRIM40-207ENST00000396581 GJC1P36383 396 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF132P52740 706 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 WNT7BP56706 349 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 PGM5Q15124 567 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 HIF1AQ16665 826 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
TRIM40-207ENST00000396581 RFWD3Q6PCD5 774 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 PASD1Q8IV76 773 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 UBR7Q8N806 425 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 NAT8LQ8N9F0 302 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 TCP10LQ8TDR4 215 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 DCAKDQ8WVC6 231 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 FRMD8P1Q9BZ68 369 aaPredicted RBP13.98□□□□□ -0.17
TRIM40-207ENST00000396581 MANSC1Q9H8J5 431 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 KLHL11Q9NVR0 708 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
TRIM40-207ENST00000396581 LRCH1Q9Y2L9 728 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 SCN4AP35499 1836 aa13.98□□□□□ -0.17
TRIM40-207ENST00000396581 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 SPDYE5A6NIY4 337 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 H0Y3Z8 333 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 H0YCG3 227 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 SMAPO00193 183 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 HAUS5O94927 633 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PIK3CAP42336 1068 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ETV4P43268 484 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TUBP50607 506 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PPP1R15BQ5SWA1 713 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 SPOPLQ6IQ16 392 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms