RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 RBM15BQ8NDT2 890 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 GATA6Q92908 595 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 OXNAD1Q96HP4 312 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ASCC2Q9H1I8 757 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 CYP4F11Q9HBI6 524 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 RHBDL2Q9NX52 303 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 CLIC5Q9NZA1 410 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 LNPEPQ9UIQ6 1025 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PPM1HQ9ULR3 514 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TRAFD1O14545 582 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ABLIM1O14639 778 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SLC26A4O43511 780 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TOMM70O94826 608 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 GSTA2P09210 222 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SPATA31D3P0C874 917 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SLC1A1P43005 524 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 JAG1P78504 1218 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TMPRSS15P98073 1019 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 FAAP100Q0VG06 881 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 KLF1Q13351 362 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 RGS9BPQ6ZS82 235 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SPATA31D4Q6ZUB0 917 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 PRPF39Q86UA1 669 aaKnown RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TREML1Q86YW5 311 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SCUBE1Q8IWY4 988 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 POU5F2Q8N7G0 328 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF513Q8N8E2 541 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SMC1BQ8NDV3 1235 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SLC26A7Q8TE54 656 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ACAP3Q96P50 834 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 COA1Q9GZY4 146 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 RANBP17Q9H2T7 1088 aaKnown RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 EBF3Q9H4W6 596 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SENP1Q9P0U3 644 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ANGPTL2Q9UKU9 493 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF541Q9H0D2 1346 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TCRBV7S3A2A0A539 114 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CREB3O43889 395 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ECE2O60344 883 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 OR6B1O95007 311 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 PGM3O95394 542 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ADSSP30520 456 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF280AP59817 542 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-203ENST00000396547 SLC5A9Q2M3M2 681 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 TEKT1Q969V4 418 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 MTBPQ96DY7 904 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CFAP36Q96G28 342 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 GMLQ99445 158 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 WDR11Q9BZH6 1224 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 DBNDD1Q9H9R9 158 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 PDP2Q9P2J9 529 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 PACSIN3Q9UKS6 424 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 ZHX2Q9Y6X8 837 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CLUHO75153 1309 aa10.31□□□□□ -0.76
TRIM39-203ENST00000396547 CYB561D2O14569 222 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ALOX15BO15296 676 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 RNASEH1O60930 286 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ABHD2P08910 425 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 DSG1Q02413 1049 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 NFIL3Q16649 462 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 BRDTQ58F21 947 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 WDR44Q5JSH3 913 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ZCCHC23Q6ZST2 131 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 USP50Q70EL3 339 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 NIM1KQ8IY84 436 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ARHGAP24Q8N264 748 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 GSTCDQ8NEC7 633 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 AGBL3Q8NEM8 1001 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 FAM81AQ8TBF8 368 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 RSAD2Q8WXG1 361 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SERAC1Q96JX3 654 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 TRAPPC9Q96Q05 1148 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ETNK2Q9NVF9 386 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 MTO1Q9Y2Z2 717 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 HNRNPDLO14979 420 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 AVILO75366 819 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 PDE5AO76074 875 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SORBS2O94875 1100 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 INHBAP08476 426 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 PHBP35232 272 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ACOT2P49753 483 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 GDF10P55107 478 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SLC25A3Q00325 362 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 PTK7Q13308 1070 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 DYNC1I2Q13409 638 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 MAMLD1Q13495 774 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 UBAP2LQ14157 1087 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms