RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PAFAH2Q99487 392 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 ACSS3Q9H6R3 686 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 NPHS2Q9NP85 383 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 KANSL3Q9P2N6 904 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 PCDHGC3Q9UN70 934 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 MGAMO43451 1857 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
HOXA3-202ENST00000396352 E7ESA3 106 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 EIF4BP23588 611 aaKnown RBP16.5■□□□□ 0.23
HOXA3-202ENST00000396352 EPHB2P29323 1055 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 BACE1P56817 501 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 SMTNL2Q2TAL5 461 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 SLC45A4Q5BKX6 768 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 NLRP9Q7RTR0 991 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 ATP11CQ8NB49 1132 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 KCNV2Q8TDN2 545 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 PYROXD1Q8WU10 500 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 DCAKDQ8WVC6 231 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 TCRBV7S3A2A0A539 114 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 STAM2O75886 525 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 PAX7P23759 505 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 RFC1P35251 1148 aaPredicted RBP16.5■□□□□ 0.23
HOXA3-202ENST00000396352 OAZ1P54368 228 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 GNPTABQ3T906 1256 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 LONP2Q86WA8 852 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 NIF3L1Q9GZT8 377 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 LRCH4O75427 683 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 ARL4CP56559 192 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 TAZQ16635 292 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 KIAA0319LQ8IZA0 1049 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 BANPQ8N9N5 519 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 FAXDC2Q96IV6 333 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
HOXA3-202ENST00000396352 C12orf65Q9H3J6 166 aaKnown RBP16.49■□□□□ 0.23
HOXA3-202ENST00000396352 TJP2Q9UDY2 1190 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 TMEM63AO94886 807 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 CALB2P22676 271 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 CDC25CP30307 473 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 PHBP35232 272 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 RPL22P35268 128 aaKnown RBP16.49■□□□□ 0.23
HOXA3-202ENST00000396352 KCNT1Q5JUK3 1230 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 C3orf62Q6ZUJ4 267 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 FBXO36Q8NEA4 188 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 TCP10LQ8TDR4 215 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 TLE6Q9H808 572 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 ZWILCHQ9H900 591 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
HOXA3-202ENST00000396352 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ADCY3O60266 1144 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 CST8O60676 142 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 AP3M2P53677 418 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 GRM1Q13255 1194 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 PTPN20Q4JDL3 420 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 CLNKQ7Z7G1 428 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 JOSD2Q8TAC2 188 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 SLC17A7Q9P2U7 560 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 CYTH4Q9UIA0 394 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 LNPEPQ9UIQ6 1025 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ANK1P16157 1881 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 WEE2P0C1S8 567 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 TPBGLP0DKB5 382 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ASPAP45381 313 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 MTDHQ86UE4 582 aaKnown RBP16.48■□□□□ 0.23
HOXA3-202ENST00000396352 RFWD2Q8NHY2 731 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 STK32AQ8WU08 396 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 IGKV6D-21A0A0A0MT36 114 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 TM9SF1O15321 606 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 CD48P09326 243 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 KCNA3P22001 575 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 PSMA2P25787 234 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 FSTL1Q12841 308 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 MTM1Q13496 603 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 KLHL38Q2WGJ6 581 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ZBTB33Q86T24 672 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 ENDOVQ8N8Q3 282 aaKnown RBP16.48■□□□□ 0.23
HOXA3-202ENST00000396352 PTPRN2Q92932 1015 aa16.48■□□□□ 0.23
HOXA3-202ENST00000396352 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 KDELR1P24390 212 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 TNFAIP1Q13829 316 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 TARBP2Q15633 366 aaKnown RBP16.47■□□□□ 0.23
HOXA3-202ENST00000396352 FYB2Q5VWT5 728 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 ZPBP2Q6X784 338 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 SCARA5Q6ZMJ2 495 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 ANKRD27Q96NW4 1050 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 FRMD8P1Q9BZ68 369 aaPredicted RBP16.47■□□□□ 0.23
HOXA3-202ENST00000396352 GOLGA8RI6L899 631 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 MSCO60682 206 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 PTPN4P29074 926 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 ABL2P42684 1182 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms