RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 VTNP04004 478 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SHBGP04278 402 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 PAEPP09466 180 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CYP2C9P11712 490 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CHRNB2P17787 502 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SAT1P21673 171 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CDH8P55286 799 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 KCTD19Q17RG1 926 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 GOLGA7BQ2TAP0 167 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CELF3Q5SZQ8 465 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 SYCP2LQ5T4T6 812 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 LBX2Q6XYB7 198 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 MAML1Q92585 1016 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ART4Q93070 314 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 FRMD8Q9BZ67 464 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 DHX33Q9H6R0 707 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 HAUS2Q9NVX0 235 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 NINJ2Q9NZG7 142 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 DNPEPQ9ULA0 475 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SHOC2Q9UQ13 582 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 USH1CQ9Y6N9 552 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 DNALI1O14645 258 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 MTA2O94776 668 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 NPTXRO95502 500 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 C4BPAP04003 597 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 SRGAP2BP0DMP2 458 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ARFIP2P53365 341 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 GEMIN4P57678 1058 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 RCN2Q14257 317 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 DCAF4L1Q3SXM0 396 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 NOTUMQ6P988 496 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 CRLF3Q8IUI8 442 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 CFAP61Q8NHU2 1237 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 C12orf42Q96LP6 360 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ACO2Q99798 780 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 NEUROG2Q9H2A3 272 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 UBN1Q9NPG3 1134 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ZFP69BQ9UJL9 534 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 TMEM59LQ9UK28 342 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 SHOX2O60902 331 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 ICAM3P32942 547 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 TNFSF9P41273 254 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ACADSBP45954 432 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ENPEPQ07075 957 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ACTN3Q08043 901 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 ITIH4Q14624 930 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ACOT1Q86TX2 421 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 AFAP1L2Q8N4X5 818 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.86□□□□□ -1.31
BDNF-203ENST00000395978 RXFP2Q8WXD0 754 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 CENPTQ96BT3 561 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 OPTNQ96CV9 577 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 SLC13A1Q9BZW2 595 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 ALG13Q9NP73 1137 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 TLK1Q9UKI8 766 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 BARX2Q9UMQ3 279 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 UBQLN1Q9UMX0 589 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 LACTBL1A8MY62 500 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 CYP2C8P10632 490 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 PECAM1P16284 738 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 GNL1P36915 607 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 RPL7AP62424 266 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 DNAJC3Q13217 504 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 NME3Q13232 169 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 AUHQ13825 339 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 PLCB4Q15147 1175 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 KIZQ2M2Z5 673 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 ATP13A4Q4VNC1 1196 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 RAPH1Q70E73 1250 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 PLPPR4Q7Z2D5 763 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 PID1Q7Z2X4 250 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 NUDCD3Q8IVD9 361 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 WDR75Q8IWA0 830 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 PDCD7Q8N8D1 485 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 UPF1Q92900 1129 aaKnown RBP eCLIP6.86□□□□□ -1.31
BDNF-203ENST00000395978 CPB2Q96IY4 423 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 FAM193BQ96PV7 902 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 PARK7Q99497 189 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 KLF6Q99612 283 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 BFARQ9NZS9 450 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 MAFBQ9Y5Q3 323 aaPredicted RBP6.86□□□□□ -1.31
BDNF-203ENST00000395978 SBF2Q86WG5 1849 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 CHD4Q14839 1912 aa6.86□□□□□ -1.31
BDNF-203ENST00000395978 TCRBV7S2A1N4TA0A589 114 aa6.85□□□□□ -1.31
BDNF-203ENST00000395978 HAUS5O94927 633 aa6.85□□□□□ -1.31
BDNF-203ENST00000395978 EGFRP00533 1210 aa6.85□□□□□ -1.31
BDNF-203ENST00000395978 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
BDNF-203ENST00000395978 RARBP10826 455 aa6.85□□□□□ -1.31
BDNF-203ENST00000395978 KRT4P19013 534 aa6.85□□□□□ -1.31
BDNF-203ENST00000395978 MMP8P22894 467 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms