RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CLVS1Q8IUQ0 354 aaPredicted RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RAVER1Q8IY67 606 aaKnown RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 GALNT4Q8N4A0 578 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 LILRB1Q8NHL6 650 aaPredicted RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RAB3IL1Q8TBN0 382 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 SNX29Q8TEQ0 813 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ART4Q93070 314 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 FBXL18Q96ME1 805 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 KLHL25Q9H0H3 589 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 CDC42EP4Q9H3Q1 356 aaKnown RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 MARCH7Q9H992 704 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ZFYVE28Q9HCC9 887 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 XAB2Q9HCS7 855 aaKnown RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 A0A1W2PRG0 241 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ZNF213O14771 459 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RIMBP2O15034 1052 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ACSL3O95573 720 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 FGAP02671 866 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 CYP1A2P05177 515 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 PDE6AP16499 860 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ZNF23P17027 643 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
CDRT1-204ENST00000395906 SLC18A1P54219 525 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 CHRNEQ04844 493 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 TNIP1Q15025 636 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 EPHA7Q15375 998 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 CYP2A13Q16696 494 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 FAM91A1Q658Y4 838 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 NATD1Q8N6N6 113 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 VPS37AQ8NEZ2 397 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 DENND1AQ8TEH3 1009 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 HPS1Q92902 700 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RANBP9Q96S59 729 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RNF38Q9H0F5 515 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 KANSL3Q9P2N6 904 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 STK39Q9UEW8 545 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 POU2F3Q9UKI9 436 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ADAMTS6Q9UKP5 1117 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 RAB26Q9ULW5 256 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 B3GNT3Q9Y2A9 372 aa10.13□□□□□ -0.79
CDRT1-204ENST00000395906 ABCB11O95342 1321 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 FRMPD4Q14CM0 1322 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PVALEFA0A1B0GWK0 134 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 B2RBV5 119 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 H3BNX3 289 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CASQ2O14958 399 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 KLRC4O43908 158 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CDH16O75309 829 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 FAM58BPP0C7Q3 252 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 JAK1P23458 1154 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 EPS15P42566 896 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SLC1A1P43005 524 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 IST1P53990 364 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ZBTB16Q05516 673 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 GRAPQ13588 217 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 TRIP10Q15642 601 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 DNAL1Q4LDG9 190 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SGO2Q562F6 1265 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PLEKHG4Q58EX7 1191 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ITPRIPL1Q6GPH6 555 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CYP4V2Q6ZWL3 525 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 NT5DC3Q86UY8 548 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ANGPTL6Q8NI99 470 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 GRAPLQ8TC17 118 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PEX13Q92968 403 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 GCNAQ96QF7 691 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 NAPBQ9H115 298 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SEPT10Q9P0V9 454 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SLC7A8Q9UHI5 535 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PCDHA4Q9UN74 947 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PLA2G4CQ9UP65 541 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SQORQ9Y6N5 450 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 SYCE1LA8MT33 242 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PRPF4O43172 522 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 DNAJA2O60884 412 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 UFL1O94874 794 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 DEXIO95424 95 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 KRT6AP02538 564 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 KRT6BP04259 564 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 GLULP15104 373 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CES1P23141 567 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PRDX6P30041 224 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CIITAP33076 1130 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ALDH3B2P48448 385 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ERFP50548 548 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ATP2C1P98194 919 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 IFITM2Q01629 132 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 UBE4AQ14139 1066 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 TRIM16LQ309B1 348 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CCDC58Q4VC31 144 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms