RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HES6Q96HZ4 224 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SRPK1Q96SB4 655 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 COLEC11Q9BWP8 271 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ILKAPQ9H0C8 392 aaPredicted RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 AGPAT3Q9NRZ7 376 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KANSL1LA0AUZ9 987 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 FKBP9O95302 570 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 VSNL1P62760 191 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM62Q0P6H9 643 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KBTBD12Q3ZCT8 623 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KHDRBS2Q5VWX1 349 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 FKBP9P1Q75LS8 142 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 TC2NQ8N9U0 490 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PCMTD2Q9NV79 361 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ERCC6L2Q5T890 1561 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 B3GAT3O94766 335 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 TOMM70O94826 608 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ETFBP38117 255 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 LHX1P48742 406 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SKIV2LQ15477 1246 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF484Q5JVG2 852 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CDR2LQ86X02 465 aaPredicted RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PGBD3Q8N328 593 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CYFIP2Q96F07 1278 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ZDHHC15Q96MV8 337 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 WHRNQ9P202 907 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 NAGPAQ9UK23 515 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PPP2R3BQ9Y5P8 575 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 HOXA2O43364 376 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KPNA6O60684 536 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 GUCA1CO95843 209 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 BCAT1P54687 386 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 FCGRTP55899 365 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 POU4F1Q01851 419 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SMTNL2Q2TAL5 461 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PRPF39Q86UA1 669 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 OSBPL1AQ9BXW6 950 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ADGRE3Q9BY15 652 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 UBQLN1Q9UMX0 589 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ATP11BQ9Y2G3 1177 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SPACA6W5XKT8 324 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DIP2CQ9Y2E4 1556 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM120BA0PK00 339 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SUPT3HB4E1H0 165 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KIF1CO43896 1103 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CHRM3P20309 590 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 EPHB2P29323 1055 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 KLHDC7AQ5VTJ3 777 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ADCK2Q7Z695 626 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SEPT3Q9UH03 358 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DTNAQ9Y4J8 743 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 IQSEC2Q5JU85 1478 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 GOLGA4Q13439 2230 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 OGTO15294 1046 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 MLNP12872 115 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 VCLP18206 1134 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 RUNX1T1Q06455 604 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 BBS7Q8IWZ6 715 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 NUP93Q8N1F7 819 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 GMCL1Q96IK5 515 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SH2D3AQ9BRG2 576 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CINPQ9BW66 212 aaPredicted RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 UBXN6Q9BZV1 441 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 RAD51CO43502 376 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 EGFRP00533 1210 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 MAPK7Q13164 816 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 ZRANB3Q5FWF4 1079 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 C10orf120Q5SQS8 335 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SLFN11Q7Z7L1 901 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 OOSP2Q86WS3 158 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PLEKHA8Q96JA3 519 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM245Q9H330 911 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 STN1Q9H668 368 aaKnown RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DPP7Q9UHL4 492 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 GTF3C4Q9UKN8 822 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 A0A1B0GW55 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 VWA5AO00534 786 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L2P0CJ85 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L3P0CJ86 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L4P0CJ87 422 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L5P0CJ88 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L6P0CJ89 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 DUX4L7P0CJ90 424 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PON1P27169 355 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 SREBF1P36956 1147 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 BACE1P56817 501 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CCZ1BP86790 482 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 CCZ1P86791 482 aaPredicted RBP5.67□□□□□ -1.5
VPS13C-204ENST00000395898 RFX8Q6ZV50 586 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 PLD3Q8IV08 490 aa5.67□□□□□ -1.5
VPS13C-204ENST00000395898 FAM162AQ96A26 154 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms