RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CFHP08603 1231 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 MMP8P22894 467 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 BRD2P25440 801 aaKnown RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 RABGGTBP53611 331 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 RAD23BP54727 409 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 DSC1Q08554 894 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 PTP4A2Q12974 167 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 MESDQ14696 234 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 TMCO3Q6UWJ1 677 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 COLGALT2Q8IYK4 626 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 SMYD3Q9H7B4 428 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 NRDE2Q9H7Z3 1164 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 TMEM59LQ9UK28 342 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 KIAA1257Q9ULG3 409 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 CASTOR2A6NHX0 329 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 B4GALT3O60512 393 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 ERLIN1O75477 346 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 COMTP21964 271 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 RRM1P23921 792 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 CTNNA2P26232 953 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 SLC1A1P43005 524 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 ZNF394Q53GI3 561 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 PLEKHA7Q6IQ23 1121 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 PASD1Q8IV76 773 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 WHAMMQ8TF30 809 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 CD101Q93033 1021 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 TMEM176AQ96HP8 235 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 PNKPQ96T60 521 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 ZSWIM1Q9BR11 485 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 PRO3102Q9H379 93 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 HCSTQ9UBK5 93 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 DNAJB4Q9UDY4 337 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 COL4A6Q14031 1691 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 CCDC66A2RUB6 948 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 ATP8B1O43520 1251 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 ALDH2P05091 517 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 LRPAP1P30533 357 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 RPL9P32969 192 aaKnown RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 RAP1GAPP47736 663 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 SPOUT1Q5T280 376 aaKnown RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 C9orf57Q5W0N0 161 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 FIBCD1Q8N539 461 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 SLC4A11Q8NBS3 891 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 TFAP2BQ92481 460 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 DDX27Q96GQ7 796 aaKnown RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 NAP1L3Q99457 506 aaPredicted RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 C11orf70Q9BRQ4 267 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 CWH43Q9H720 699 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 RBM12Q9NTZ6 932 aaKnown RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 SMARCAL1Q9NZC9 954 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 EHD2Q9NZN4 543 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 CACNG4Q9UBN1 327 aa20.41■□□□□ 0.86
LMNB1-202ENST00000395354 RANBP2P49792 3224 aaKnown RBP20.41■□□□□ 0.86
LMNB1-202ENST00000395354 VDRP11473 427 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 PNPLA4P41247 253 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 OR1G1P47890 313 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 CLCNKBP51801 687 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 CDH8P55286 799 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 SP7Q8TDD2 431 aaPredicted RBP20.4■□□□□ 0.86
LMNB1-202ENST00000395354 UROC1Q96N76 676 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 ARFGAP3Q9NP61 516 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 PARVAQ9NVD7 372 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 ANAPC7Q9UJX3 599 aa20.4■□□□□ 0.86
LMNB1-202ENST00000395354 MRPL42Q9Y6G3 142 aaKnown RBP20.4■□□□□ 0.86
LMNB1-202ENST00000395354 FAM170AA1A519 330 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 CCDC188H7C350 402 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 MYO1FO00160 1098 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 PIRO00625 290 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 MYOGP15173 224 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 CD19P15391 556 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 CTNNA1P35221 906 aaKnown RBP20.39■□□□□ 0.85
LMNB1-202ENST00000395354 TAP1Q03518 808 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 MAMLD1Q13495 774 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 PTPROQ16827 1216 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 UPP1Q16831 310 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 CC2D1AQ6P1N0 951 aaPredicted RBP20.39■□□□□ 0.85
LMNB1-202ENST00000395354 MMS22LQ6ZRQ5 1243 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 TMEM175Q9BSA9 504 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 ELOVL4Q9GZR5 314 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 CHORDC1Q9UHD1 332 aaPredicted RBP20.39■□□□□ 0.85
LMNB1-202ENST00000395354 PCDHA3Q9Y5H8 950 aa20.39■□□□□ 0.85
LMNB1-202ENST00000395354 LCHNA4D1U4 455 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 TMEM110-MUSTN1A8MSY1 372 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PODXLO00592 558 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PPEF2O14830 753 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 SPOPO43791 374 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 ALDH7A1P49419 539 aaKnown RBP20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PEX5P50542 639 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 BCAR1P56945 870 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 STILQ15468 1287 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 CNGA2Q16280 664 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 DCLRE1AQ6PJP8 1040 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 WDTC1Q8N5D0 677 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 ZNF560Q96MR9 790 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 STRIP2Q9ULQ0 834 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 FAN1Q9Y2M0 1017 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms