RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 CENPUQ71F23 418 aa21.67■■□□□ 1.06
CLK3-202ENST00000395066 RHPN2Q8IUC4 686 aa21.67■■□□□ 1.06
CLK3-202ENST00000395066 ARMC2Q8NEN0 867 aa21.67■■□□□ 1.06
CLK3-202ENST00000395066 LRRC8CQ8TDW0 803 aa21.67■■□□□ 1.06
CLK3-202ENST00000395066 PRPF31Q8WWY3 499 aaKnown RBP21.67■■□□□ 1.06
CLK3-202ENST00000395066 NXF1Q9UBU9 619 aaKnown RBP21.67■■□□□ 1.06
CLK3-202ENST00000395066 PCSK1NQ9UHG2 260 aa21.67■■□□□ 1.06
CLK3-202ENST00000395066 PRPF4O43172 522 aaKnown RBP eCLIP21.66■■□□□ 1.06
CLK3-202ENST00000395066 CST8O60676 142 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 PSMA2P25787 234 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 OVGP1Q12889 678 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 CCDC142Q17RM4 750 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 PTPN20Q4JDL3 420 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 PPP1R15BQ5SWA1 713 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 HHATQ5VTY9 493 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 TMEM35BQ8NCS4 154 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 ZBTB10Q96DT7 871 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 CDHR1Q96JP9 859 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 TTC25Q96NG3 672 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 TEX13BQ9BXU2 312 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 C3orf70A6NLC5 250 aaPredicted RBP21.66■■□□□ 1.06
CLK3-202ENST00000395066 TYROBPO43914 113 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 MYCNP04198 464 aaPredicted RBP21.66■■□□□ 1.06
CLK3-202ENST00000395066 CD19P15391 556 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 CALB2P22676 271 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 PDK4Q16654 411 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 MAPK6Q16659 721 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 DRICH1Q6PGQ1 229 aaPredicted RBP21.66■■□□□ 1.06
CLK3-202ENST00000395066 MICALL2Q8IY33 904 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 SCYL3Q8IZE3 742 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 LRRC71Q8N4P6 559 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 CEP120Q8N960 986 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 CPT1BQ92523 772 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 RABGEF1Q9UJ41 708 aa21.66■■□□□ 1.06
CLK3-202ENST00000395066 FAM189A1O60320 539 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 EDF1O60869 148 aaKnown RBP21.65■■□□□ 1.06
CLK3-202ENST00000395066 PEX11AO75192 247 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 GJB1P08034 283 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 MCL1Q07820 350 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 NR1H3Q13133 447 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 OTOAQ7RTW8 1153 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 BRSK2Q8IWQ3 736 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 SLC35B2Q8TB61 432 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 INPP5DQ92835 1189 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 NPHS2Q9NP85 383 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 UBN1Q9NPG3 1134 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 PICK1Q9NRD5 415 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 PHIPQ8WWQ0 1821 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 EIF4E1BA6NMX2 242 aaKnown RBP21.65■■□□□ 1.06
CLK3-202ENST00000395066 ITGAVP06756 1048 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 CDH8P55286 799 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 TDRPQ86YL5 185 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 THNSL1Q8IYQ7 743 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 FOXP3Q9BZS1 431 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 PCDH9Q9HC56 1237 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 STK32BQ9NY57 414 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 PSMC3IPQ9P2W1 217 aaPredicted RBP21.65■■□□□ 1.06
CLK3-202ENST00000395066 DCTN4Q9UJW0 460 aa21.65■■□□□ 1.06
CLK3-202ENST00000395066 DRG1Q9Y295 367 aaKnown RBP21.65■■□□□ 1.06
CLK3-202ENST00000395066 ADCY3O60266 1144 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 LRCH4O75427 683 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 DCTN3O75935 186 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 C3orf62Q6ZUJ4 267 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 UNC45BQ8IWX7 931 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 FAM13CQ8NE31 585 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 PYROXD1Q8WU10 500 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 NKD2Q969F2 451 aaPredicted RBP21.64■■□□□ 1.06
CLK3-202ENST00000395066 NIF3L1Q9GZT8 377 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 FARP1Q9Y4F1 1045 aaPredicted RBP21.64■■□□□ 1.06
CLK3-202ENST00000395066 LRRC42Q9Y546 428 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.06
CLK3-202ENST00000395066 TMEM63AO94886 807 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 UBA1P22314 1058 aaKnown RBP21.64■■□□□ 1.05
CLK3-202ENST00000395066 ALDH3A1P30838 453 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 STXBP2Q15833 593 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 BBS9Q3SYG4 887 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 PLEKHG4Q58EX7 1191 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 FBXO36Q8NEA4 188 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 STK32AQ8WU08 396 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 C10orf82Q8WW14 230 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 SLC17A7Q9P2U7 560 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 SHOC2Q9UQ13 582 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 AFG3L2Q9Y4W6 797 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 LCTP09848 1927 aa21.64■■□□□ 1.05
CLK3-202ENST00000395066 E7ENQ6 273 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 PIK3R2O00459 728 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 T-ENOLP0DO92 83 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 RPL22P35268 128 aaKnown RBP21.63■■□□□ 1.05
CLK3-202ENST00000395066 RAD23BP54727 409 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 SLC25A11Q02978 314 aaKnown RBP21.63■■□□□ 1.05
CLK3-202ENST00000395066 PIGHQ14442 188 aaPredicted RBP21.63■■□□□ 1.05
CLK3-202ENST00000395066 TRIM68Q6AZZ1 485 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 RGS9BPQ6ZS82 235 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 TEX9Q8N6V9 391 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 ZNF75CPQ92670 426 aaPredicted RBP21.63■■□□□ 1.05
CLK3-202ENST00000395066 ZMYND8Q9ULU4 1186 aaPredicted RBP21.63■■□□□ 1.05
CLK3-202ENST00000395066 A6NHS1 94 aa21.63■■□□□ 1.05
CLK3-202ENST00000395066 MSCO60682 206 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms