RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ITGB3P05106 788 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 GSTA1P08263 222 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ACO1P21399 889 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 UBA1P22314 1058 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 PEX19P40855 299 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TAF5Q15542 800 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TAF11Q15544 211 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ANKRD22Q5VYY1 191 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 FAM228AQ86W67 206 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 USH1CQ9Y6N9 552 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 UBR3Q6ZT12 1888 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 LPXNO60711 386 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 NEBLO76041 1014 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 APRTP07741 180 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 KRT7P08729 469 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 ATP4AP20648 1035 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 YY1P25490 414 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 GDF10P55107 478 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 LAMTOR4Q0VGL1 99 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-203ENST00000394419 RHBDF2Q6PJF5 856 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 MTDHQ86UE4 582 aaKnown RBP11.06□□□□□ -0.64
ACTN1-203ENST00000394419 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 RILPQ96NA2 401 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PAFAH2Q99487 392 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.06□□□□□ -0.64
ACTN1-203ENST00000394419 OGTO15294 1046 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PRPSAP2O60256 369 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PDGFRAP16234 1089 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 CPA2P48052 419 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 TGFB2P61812 414 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
ACTN1-203ENST00000394419 MTFR1Q15390 333 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 TRABD2AQ86V40 505 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PHF13Q86YI8 300 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-203ENST00000394419 TCP10LQ8TDR4 215 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 PPP1R13LQ8WUF5 828 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 FAM111AQ96PZ2 611 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 CSADQ9Y600 493 aa11.06□□□□□ -0.64
ACTN1-203ENST00000394419 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 MED7O43513 233 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 AVILO75366 819 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 GEMIN4P57678 1058 aaKnown RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 TAF1BQ53T94 588 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 SESTD1Q86VW0 696 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 UNC45BQ8IWX7 931 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 ALLCQ8N6M5 410 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 COPS5Q92905 334 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 TEPSINQ96N21 525 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 DDX56Q9NY93 547 aaKnown RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 hCG_1818297A0A087WSY0 165 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PMM2O15305 246 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 KCNN4O15554 427 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 MGRN1O60291 552 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 EDN1P05305 212 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PDHA1P08559 390 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 DESP17661 470 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 RASSF2P50749 326 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 YWHAEP62258 255 aaKnown RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 NR1H3Q13133 447 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 MORF4L2Q15014 288 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 VCPIP1Q96JH7 1222 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 NUDCD1Q96RS6 583 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 FAM49BQ9NUQ9 324 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 STRIP2Q9ULQ0 834 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 SLC12A4Q9UP95 1085 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 DCTN3O75935 186 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 ASS1P00966 412 aaKnown RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 EPHB2P29323 1055 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 RAD23BP54727 409 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 KLF1Q13351 362 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 C15orf59Q2T9L4 293 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 HSDL1Q3SXM5 330 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 EFCAB12Q6NXP0 572 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 PPIL6Q8IXY8 311 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 GRAMD1AQ96CP6 724 aa11.05□□□□□ -0.64
ACTN1-203ENST00000394419 SMG5Q9UPR3 1016 aaKnown RBP11.05□□□□□ -0.64
ACTN1-203ENST00000394419 ZBED1O96006 694 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 ABCD1P33897 745 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 RPL22P35268 128 aaKnown RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 ELK3P41970 407 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 EFNA5P52803 228 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 ROR1Q01973 937 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 PTK7Q13308 1070 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 GJC2Q5T442 439 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 NLRP9Q7RTR0 991 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms