RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 NR3C1P04150 777 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 PTPN2P17706 415 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 NR2F2P24468 414 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 HOXC13P31276 330 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 RDXP35241 583 aaKnown RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 KPNA1P52294 538 aaPredicted RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 EFNA5P52803 228 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 COPB1P53618 953 aaKnown RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 CREB5Q02930 508 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 KCNA1Q09470 495 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 GRIK3Q13003 919 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 STRN3Q13033 797 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 MYBPC2Q14324 1141 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 WDR44Q5JSH3 913 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 PRSS36Q5K4E3 855 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 FAM171A1Q5VUB5 890 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 ZC3H3Q8IXZ2 948 aaKnown RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 SMARCD2Q92925 531 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 KCNN1Q92952 543 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 MKNK1Q9BUB5 465 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 C2orf40Q9H1Z8 148 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 SLC32A1Q9H598 525 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 ARHGAP28Q9P2N2 729 aa11.91□□□□□ -0.5
VTI1BP2-201ENST00000394154 A0A1B0GTH6 734 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 BCLAF3A2AJT9 711 aaKnown RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 WDR27A2RRH5 827 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 H0Y626 953 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 K7ERI5 159 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 KHNYNO15037 678 aaKnown RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 CLIC2O15247 247 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 TGFB1I1O43294 461 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 EXTL3O43909 919 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 ERLIN2O94905 339 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 TRIM16O95361 564 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 PXNP49023 591 aaPredicted RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 ELAVL2Q12926 359 aaKnown RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 CCINQ13939 588 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 RALGPS2Q86X27 583 aaPredicted RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 MFSD6LQ8IWD5 586 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 ZBTB8OSQ8IWT0 167 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 RABGGTAQ92696 567 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 NAP1L5Q96NT1 182 aaPredicted RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 TUBGCP2Q9BSJ2 902 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 DUSP15Q9H1R2 295 aaPredicted RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 VPS16Q9H269 839 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 HES2Q9Y543 173 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.5
VTI1BP2-201ENST00000394154 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLC38A8A6NNN8 435 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 CYSRT1A8MQ03 144 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SPECC1L-ADORA2AF8WAN1 911 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 NRG2O14511 850 aaPredicted RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLC16A3O15427 465 aaKnown RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 LRG1P02750 347 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SRGAP2CP0DJJ0 459 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 AXLP30530 894 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 CTHP32929 405 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 OR1D2P34982 312 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 POU5F1BQ06416 359 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 CAPSQ13938 189 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 NR1I3Q14994 352 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 APTXQ7Z2E3 356 aaKnown RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLC9A9Q8IVB4 645 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SPC24Q8NBT2 197 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 HASPINQ8TF76 798 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 E2F7Q96AV8 911 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 BICD1Q96G01 975 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 KIFC3Q9BVG8 833 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 MINDY3Q9H8M7 445 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 TRPV4Q9HBA0 871 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 METTL14Q9HCE5 456 aaKnown RBP11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLC8A2Q9UPR5 921 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
VTI1BP2-201ENST00000394154 VWA8A3KMH1 1905 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 NUP205Q92621 2012 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 ARHGEF37A1IGU5 675 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 CHADO15335 359 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 VIPR2P41587 438 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms