RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
CNP-201ENST00000393888 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
CNP-201ENST00000393888 ANGPTL2Q9UKU9 493 aa17.23■□□□□ 0.35
CNP-201ENST00000393888 CHMP2BQ9UQN3 213 aa17.23■□□□□ 0.35
CNP-201ENST00000393888 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 BBOX1O75936 387 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 MAPTP10636 758 aaKnown RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 PHBP35232 272 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 OASLQ15646 514 aaKnown RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 SCUBE1Q8IWY4 988 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 RCOR2Q8IZ40 523 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 FEZF2Q8TBJ5 459 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 SPATA16Q9BXB7 569 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 FAM155BO75949 473 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 SERPINB2P05120 415 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 WNT7BP56706 349 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 PSMC5P62195 406 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 NOMO3P69849 1222 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 USP4Q13107 963 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 KRT72Q14CN4 511 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 HSF5Q4G112 596 aaPredicted RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 RAPH1Q70E73 1250 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 ATP11CQ8NB49 1132 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 CPT1BQ92523 772 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 MXRA8Q9BRK3 442 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 PHACTR1Q9C0D0 580 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 MRPL47Q9HD33 250 aaKnown RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 SSU72Q9NP77 194 aaKnown RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 DMAP1Q9NPF5 467 aaPredicted RBP17.22■□□□□ 0.35
CNP-201ENST00000393888 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
CNP-201ENST00000393888 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 MEI4A8MW99 385 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 NPTX2P47972 431 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 GCNT1Q02742 428 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 ZNF252P-AS1Q0IIN9 211 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 XKR9Q5GH70 373 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 HHIPL2Q6UWX4 724 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 TMEM161BQ8NDZ6 487 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 AZIN2Q96A70 460 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 SENP7Q9BQF6 1050 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 FAM192AQ9GZU8 254 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 MMADHCQ9H3L0 296 aaPredicted RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 SHOC2Q9UQ13 582 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 A8MXQ7 604 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 GNA15P30679 374 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 QARSP47897 775 aaKnown RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 CDC16Q13042 620 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 PTK7Q13308 1070 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 DYNC1I2Q13409 638 aaKnown RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 LRRC23Q53EV4 343 aaPredicted RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 C1orf146Q5VVC0 180 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 CDHR3Q6ZTQ4 885 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 MFSD14AQ96MC6 490 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 MCEEQ96PE7 176 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 NDE1Q9NXR1 346 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 DDX43Q9NXZ2 648 aaKnown RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 SLC7A8Q9UHI5 535 aa17.21■□□□□ 0.35
CNP-201ENST00000393888 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.35
CNP-201ENST00000393888 TMEM63AO94886 807 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 ETV4P43268 484 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 ALDH18A1P54886 795 aaKnown RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 OGDHQ02218 1023 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 BRDTQ58F21 947 aaPredicted RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 ULK2Q8IYT8 1036 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.2■□□□□ 0.34
CNP-201ENST00000393888 NR1H4Q96RI1 486 aaPredicted RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 DHRS4Q9BTZ2 278 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 hCG_1818297A0A087WSY0 165 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 A6NJR5 290 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 TNNI1P19237 187 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 DLGAP5Q15398 846 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 GSTA3Q16772 222 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 LIN52Q52LA3 116 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 ISLR2Q6UXK2 745 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 ARID3BQ8IVW6 561 aaPredicted RBP17.2■□□□□ 0.34
CNP-201ENST00000393888 ARHGAP24Q8N264 748 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 TMEM174Q8WUU8 243 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
CNP-201ENST00000393888 OPHN1O60890 802 aa17.19■□□□□ 0.34
CNP-201ENST00000393888 CIB2O75838 187 aa17.19■□□□□ 0.34
CNP-201ENST00000393888 CCNFP41002 786 aa17.19■□□□□ 0.34
CNP-201ENST00000393888 KLHL38Q2WGJ6 581 aa17.19■□□□□ 0.34
CNP-201ENST00000393888 KCNT1Q5JUK3 1230 aa17.19■□□□□ 0.34
CNP-201ENST00000393888 ABRAQ8N0Z2 381 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms