RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RARAP10276 462 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 GRK4P32298 578 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 TNNT3P45378 269 aaPredicted RBP15.82■□□□□ 0.12
MKS1-202ENST00000393119 GYS2P54840 703 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 CNGA2Q16280 664 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 KCNT1Q5JUK3 1230 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 KIAA0319Q5VV43 1072 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 TRNP1Q6NT89 227 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 APBB1IPQ7Z5R6 666 aaPredicted RBP15.82■□□□□ 0.12
MKS1-202ENST00000393119 PCSK9Q8NBP7 692 aaKnown RBP15.82■□□□□ 0.12
MKS1-202ENST00000393119 C1orf54Q8WWF1 131 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 NEUROG2Q9H2A3 272 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 SYNCQ9H7C4 482 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 YY1AP1Q9H869 796 aa15.82■□□□□ 0.12
MKS1-202ENST00000393119 MIF4GDA9UHW6 222 aaKnown RBP15.81■□□□□ 0.12
MKS1-202ENST00000393119 CLDN5O00501 218 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 VDRP11473 427 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 RWDD2BP57060 319 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 PAK2Q13177 524 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 SNX1Q13596 522 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 SIX1Q15475 284 aaPredicted RBP15.81■□□□□ 0.12
MKS1-202ENST00000393119 SMTNL2Q2TAL5 461 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 WSCD1Q658N2 575 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
MKS1-202ENST00000393119 CLEC4CQ8WTT0 213 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 NDRG1Q92597 394 aaKnown RBP15.81■□□□□ 0.12
MKS1-202ENST00000393119 TRIM11Q96F44 468 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 VCPIP1Q96JH7 1222 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 UNC93B1Q9H1C4 597 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 DPH5Q9H2P9 285 aa15.81■□□□□ 0.12
MKS1-202ENST00000393119 FKTNO75072 461 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 STAU1O95793 577 aaKnown RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 CKBP12277 381 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 KRT10P13645 584 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 CTNNA2P26232 953 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 MAP2K2P36507 400 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 SCUBE3Q8IX30 993 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 LRRC52Q8N7C0 313 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 GLT1D1Q96MS3 346 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 CFHR5Q9BXR6 569 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 LHX5Q9H2C1 402 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 MRPL47Q9HD33 250 aaKnown RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 HMX1Q9NP08 348 aaPredicted RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 R3HDM2Q9Y2K5 976 aaKnown RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 CEP83Q9Y592 693 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 MED7O43513 233 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 CALB1P05937 261 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 KRT3P12035 628 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 TKTP29401 623 aaKnown RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 GNL1P36915 607 aaPredicted RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 CASP8Q14790 479 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 TRAF7Q6Q0C0 670 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 SLC13A5Q86YT5 568 aaPredicted RBP15.8■□□□□ 0.12
MKS1-202ENST00000393119 MIS12Q9H081 205 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
MKS1-202ENST00000393119 B4GALT3O60512 393 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 IL1R2P27930 398 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 TAF6P49848 677 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 LCLAT1Q6UWP7 414 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 FAM183BPQ6ZVS7 135 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 SND1Q7KZF4 910 aaKnown RBP eCLIP15.79■□□□□ 0.12
MKS1-202ENST00000393119 PRUNE1Q86TP1 453 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 CCDC50Q8IVM0 306 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 C10orf67Q8IYJ2 551 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 C3orf20Q8ND61 904 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 PXYLP1Q8TE99 480 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 TSPYL2Q9H2G4 693 aaPredicted RBP15.79■□□□□ 0.12
MKS1-202ENST00000393119 STARD7Q9NQZ5 370 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 GDF3Q9NR23 364 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 CHST7Q9NS84 486 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
MKS1-202ENST00000393119 GPR182O15218 404 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 DAPK3O43293 454 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 BEST1O76090 585 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 FLT3P36888 993 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 LMAN1P49257 510 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 TUBB4BP68371 445 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 ZFYVE27Q5T4F4 411 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 SEL1L2Q5TEA6 688 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 KAZNQ674X7 775 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
MKS1-202ENST00000393119 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 ZWILCHQ9H900 591 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 PCSK1NQ9UHG2 260 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 SCINQ9Y6U3 715 aa15.79■□□□□ 0.12
MKS1-202ENST00000393119 CYB561D2O14569 222 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 CD4P01730 458 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 ITGB1P05556 798 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 RALAP11233 206 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 ECHS1P30084 290 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 PTK7Q13308 1070 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 C15orf59Q2T9L4 293 aaPredicted RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 FAM102AQ5T9C2 384 aaPredicted RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 OR6B2Q6IFH4 312 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 CTU1Q7Z7A3 348 aaKnown RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 ADGRF2Q8IZF7 708 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 TSEN2Q8NCE0 465 aaKnown RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 APPL2Q8NEU8 664 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 SLC2A14Q8TDB8 520 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 AENQ8WTP8 325 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms