RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TAS2R14Q9NYV8 317 aa14.43□□□□□ -0.1
PTN-202ENST00000393083 CAPN6Q9Y6Q1 641 aa14.43□□□□□ -0.1
PTN-202ENST00000393083 NCANO14594 1321 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 FAM170AA1A519 330 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 I3L4J1 428 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 BRCC3P46736 316 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 AARSP49588 968 aaKnown RBP eCLIP14.42□□□□□ -0.1
PTN-202ENST00000393083 GALCP54803 685 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 NAP1L1P55209 391 aaKnown RBP14.42□□□□□ -0.1
PTN-202ENST00000393083 DSG1Q02413 1049 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 ELAVL2Q12926 359 aaKnown RBP14.42□□□□□ -0.1
PTN-202ENST00000393083 MYO1EQ12965 1108 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 USP41Q3LFD5 358 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 FAM171A1Q5VUB5 890 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 NOX5Q96PH1 765 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 SDCBP2Q9H190 292 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 SALL4Q9UJQ4 1053 aa14.42□□□□□ -0.1
PTN-202ENST00000393083 CTAGE9A4FU28 777 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 BTNL10A8MVZ5 291 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 THAP12O43422 761 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 BUB1O43683 1085 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 URI1O94763 535 aaPredicted RBP14.41□□□□□ -0.1
PTN-202ENST00000393083 TMEM253P0C7T8 217 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 FGFR3P22607 806 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 GLUD2P49448 558 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 HYAL1Q12794 435 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 COL19A1Q14993 1142 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 RTP2Q5QGT7 225 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 SMYD5Q6GMV2 418 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 GPR65Q8IYL9 337 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 RNF10Q8N5U6 811 aaKnown RBP14.41□□□□□ -0.1
PTN-202ENST00000393083 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 TRIM58Q8NG06 486 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 PPM1EQ8WY54 764 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 CTNNBL1Q8WYA6 563 aaPredicted RBP14.41□□□□□ -0.1
PTN-202ENST00000393083 SUSD3Q96L08 255 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 CYP3A43Q9HB55 503 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 PRUNE2Q8WUY3 3088 aa14.41□□□□□ -0.1
PTN-202ENST00000393083 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
PTN-202ENST00000393083 SPTLC1O15269 473 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 RTN2O75298 545 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 URODP06132 367 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 GZMAP12544 262 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 ABCB4P21439 1286 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 GTF2F1P35269 517 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTN-202ENST00000393083 LILRA4P59901 499 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 CLEC16AQ2KHT3 1053 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 ZNF394Q53GI3 561 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 ZNF560Q96MR9 790 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 ISCUQ9H1K1 167 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 PDCL3Q9H2J4 239 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 TLE6Q9H808 572 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 RXFP1Q9HBX9 757 aa14.4□□□□□ -0.1
PTN-202ENST00000393083 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
PTN-202ENST00000393083 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
PTN-202ENST00000393083 A0A0A6YYK5 440 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 M0QZQ0 153 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 C2CD2LO14523 706 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 PER2O15055 1255 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 FTLP02792 175 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 BRD2P25440 801 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 TKTP29401 623 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 NRIP1P48552 1158 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 CDH8P55286 799 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 KCNC3Q14003 757 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 IFI16Q16666 785 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 DUSP6Q16828 381 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 KIAA1841Q6NSI8 718 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 TRIM72Q6ZMU5 477 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 RBM23Q86U06 439 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 PIK3R5Q8WYR1 880 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 TSC2P49815 1807 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 SYN3O14994 580 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 CLASP2O75122 1294 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 PAX3P23760 479 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 CEP57Q86XR8 500 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 VN1R2Q8NFZ6 395 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 RIN2Q8WYP3 895 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 PPP2R3CQ969Q6 453 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 ARHGEF26Q96DR7 871 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 CDCA3Q99618 268 aaPredicted RBP14.39□□□□□ -0.11
PTN-202ENST00000393083 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 SNX9Q9Y5X1 595 aa14.39□□□□□ -0.11
PTN-202ENST00000393083 VWA8A3KMH1 1905 aa14.38□□□□□ -0.11
PTN-202ENST00000393083 CILPO75339 1184 aa14.38□□□□□ -0.11
PTN-202ENST00000393083 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms