RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 UBXN11Q5T124 520 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 C9orf57Q5W0N0 161 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 UNC93AQ86WB7 457 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 ATL2Q8NHH9 583 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
PTPN11-202ENST00000392597 MTRF1LQ9UGC7 380 aaKnown RBP21.17■□□□□ 0.98
PTPN11-202ENST00000392597 H0YGN5 161 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 GAS8O95995 478 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 C6orf222P0C671 652 aaPredicted RBP21.16■□□□□ 0.98
PTPN11-202ENST00000392597 PSMA2P25787 234 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 KCNJ1P48048 391 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 PLTPP55058 493 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 PPP1R7Q15435 360 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 FBXO25Q8TCJ0 367 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 IPO4Q8TEX9 1081 aaKnown RBP21.16■□□□□ 0.98
PTPN11-202ENST00000392597 SLITRK1Q96PX8 696 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 CXCL16Q9H2A7 254 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 CHST7Q9NS84 486 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 WHRNQ9P202 907 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 TRIM17Q9Y577 477 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 SNX9Q9Y5X1 595 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 NFS1Q9Y697 457 aa21.16■□□□□ 0.98
PTPN11-202ENST00000392597 GOLGA8SH3BPF8 625 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 KRT1P04264 644 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 PNPLA4P41247 253 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 PTK6Q13882 451 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 ZNF771Q7L3S4 317 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-202ENST00000392597 C18orf25Q96B23 403 aaPredicted RBP21.15■□□□□ 0.98
PTPN11-202ENST00000392597 TJP2Q9UDY2 1190 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 PTPN22Q9Y2R2 807 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 SMIM28A0A1B0GU29 152 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 PIRO00625 290 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 PPEF2O14830 753 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 TJP3O95049 919 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 KRT14P02533 472 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 RPLP2P05387 115 aaKnown RBP21.15■□□□□ 0.98
PTPN11-202ENST00000392597 KRT7P08729 469 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 SETSIPP0DME0 302 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 CYP3A5P20815 502 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 GJC1P36383 396 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 KRT17Q04695 432 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 LLGL1Q15334 1064 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 TTMPQ5BVD1 217 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 GNASQ5JWF2 1037 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 ART4Q93070 314 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 ZNF560Q96MR9 790 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 HEMGNQ9BXL5 484 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 SPC25Q9HBM1 224 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 TSPAN16Q9UKR8 245 aa21.15■□□□□ 0.98
PTPN11-202ENST00000392597 MYADML2A6NDP7 307 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 TCF4P15884 667 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 AKAP5P24588 427 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 LBX1P52954 281 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 HADHQ16836 314 aaKnown RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 DRICH1Q6PGQ1 229 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 SPOCD1Q6ZMY3 1216 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 JOSD2Q8TAC2 188 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 UBLCP1Q8WVY7 318 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 ATG4AQ8WYN0 398 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 RNF25Q96BH1 459 aaPredicted RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 ARL8AQ96BM9 186 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 MRPL45Q9BRJ2 306 aaKnown RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 GDAP2Q9NXN4 497 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 GTF2IRD1Q9UHL9 959 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 EFR3BQ9Y2G0 817 aa21.14■□□□□ 0.97
PTPN11-202ENST00000392597 R3HDM2Q9Y2K5 976 aaKnown RBP21.14■□□□□ 0.97
PTPN11-202ENST00000392597 GOLGA6L10A6NI86 522 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 M0QZ92 97 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 MRPS6P82932 125 aaKnown RBP21.13■□□□□ 0.97
PTPN11-202ENST00000392597 SLC25A11Q02978 314 aaKnown RBP21.13■□□□□ 0.97
PTPN11-202ENST00000392597 LMNB2Q03252 620 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 CALCOCO2Q13137 446 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 SNX1Q13596 522 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 ODF2Q5BJF6 829 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 GLRA4Q5JXX5 417 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 FBXO47Q5MNV8 452 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 RAET1EQ8TD07 263 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 PXYLP1Q8TE99 480 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 TRIB2Q92519 343 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 APOL6Q9BWW8 343 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 METTL5Q9NRN9 209 aaKnown RBP21.13■□□□□ 0.97
PTPN11-202ENST00000392597 IPPQ9Y573 584 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 ITIH2P19823 946 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 EIF3BP55884 814 aaKnown RBP21.13■□□□□ 0.97
PTPN11-202ENST00000392597 ATP13A4Q4VNC1 1196 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 PKDCCQ504Y2 493 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 TFDP3Q5H9I0 405 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 MFSD7Q6UXD7 560 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 RSPH3Q86UC2 560 aa21.13■□□□□ 0.97
PTPN11-202ENST00000392597 HMGB1P1B2RPK0 211 aaPredicted RBP21.12■□□□□ 0.97
PTPN11-202ENST00000392597 LRCH4O75427 683 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 CAPN15O75808 1086 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 PFKMP08237 780 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 LMAN1P49257 510 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 SNX16P57768 344 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 CAV1Q03135 178 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 SLMAPQ14BN4 828 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 GOLGA7BQ2TAP0 167 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 CEP85LQ5SZL2 805 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms