RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TRIM27P14373 513 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DAOP14920 347 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CPA1P15085 419 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TSHRP16473 764 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PTPN1P18031 435 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NR1D1P20393 614 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HNRNPA2B1P22626 353 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GCSHP23434 173 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DGKAP23743 735 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 COL8A2P25067 703 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TIMP3P35625 211 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CPA2P48052 419 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RFX2P48378 723 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GLUD2P49448 558 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PCYT1AP49585 367 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PDLIM4P50479 330 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LIMK2P53671 638 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CRISP1P54107 249 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 EEFSECP57772 596 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HERVK_113P62684 666 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CYP4F2P78329 520 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RAE1P78406 368 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HSF1Q00613 529 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LMNB2Q03252 620 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DSC1Q08554 894 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SPOCK1Q08629 439 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FUT7Q11130 342 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SREBF2Q12772 1141 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MAP4K2Q12851 820 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SF3B2Q13435 895 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 BMPR2Q13873 1038 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MPP2Q14168 576 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KIR2DS3Q14952 304 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TESK1Q15569 626 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HLFQ16534 295 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MAP3K11Q16584 847 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CWF19L2Q2TBE0 894 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LRRFIP1Q32MZ4 808 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SNAI3Q3KNW1 292 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PLK5Q496M5 336 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KRTAP13-2Q52LG2 175 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TM4SF20Q53R12 229 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FIGNQ5HY92 759 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PCID2Q5JVF3 399 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ACBD5Q5T8D3 534 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HDGFL1Q5TGJ6 251 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 BTBD8Q5XKL5 378 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FCRL6Q6DN72 434 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 C8orf82Q6P1X6 216 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KIRREL2Q6UWL6 708 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SERPINA13PQ6UXR4 307 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NAPRTQ6XQN6 538 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TIFABQ6ZNK6 161 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 USP53Q70EK8 1073 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MED25Q71SY5 747 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 REC114Q7Z4M0 266 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 UBE2Q1Q7Z7E8 422 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLNKQ7Z7G1 428 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NOP9Q86U38 636 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KCNMB4Q86W47 210 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HPS6Q86YV9 775 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DRC7Q8IY82 874 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 UNC5BQ8IZJ1 945 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NLGN4XQ8N0W4 816 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLIP4Q8N3C7 705 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ARHGEF39Q8N4T4 335 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 EFHBQ8N7U6 833 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CDYL2Q8N8U2 506 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PRR26Q8N8Z3 221 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ATP11CQ8NB49 1132 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLEC18CQ8NCF0 446 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RCBTB1Q8NDN9 531 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC30A5Q8TAD4 765 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NEK9Q8TD19 979 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GTF3C2Q8WUA4 911 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SECTM1Q8WVN6 248 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 BTN2A2Q8WVV5 523 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GAB3Q8WWW8 586 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ATRIPQ8WXE1 791 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GATAD2BQ8WXI9 593 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LPAR1Q92633 364 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MAP4K1Q92918 833 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GLMNQ92990 594 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 USP13Q92995 863 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RFKQ969G6 155 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FKBP10Q96AY3 582 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ALKBH8Q96BT7 664 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF653Q96CK0 615 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LGALS12Q96DT0 336 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SGF29Q96ES7 293 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF799Q96GE5 643 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RCC1LQ96I51 464 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FEM1CQ96JP0 617 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ART5Q96L15 291 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DMRTB1Q96MA1 342 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 IL17FQ96PD4 163 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 UIMC1Q96RL1 719 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC9A7Q96T83 725 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KLF6Q99612 283 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HAUS7Q99871 368 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms