RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 RAB30Q15771 203 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 METRNLQ641Q3 311 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 GLIS1Q8NBF1 620 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 BPIFB1Q8TDL5 484 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 TRAPPC12Q8WVT3 735 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 SNX19Q92543 992 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 EDAQ92838 391 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 C18orf8Q96DM3 657 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 RNF31Q96EP0 1072 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 LOXL4Q96JB6 756 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 ISCA1Q9BUE6 129 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 PTDSS2Q9BVG9 487 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 CTTNBP2NLQ9P2B4 639 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 DGKBQ9Y6T7 804 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 XDHP47989 1333 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRAMEF33A0A0G2JMD5 474 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 GAGE12BA1L429 117 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 F5H697 171 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SYT5O00445 386 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 RNASET2O00584 256 aaKnown RBP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 TRIAP1O43715 76 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 RRP9O43818 475 aaKnown RBP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRAMEF10O60809 474 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 COQ9O75208 318 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SUN1O94901 812 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 ITGB3P05106 788 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 GABRB3P28472 473 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 CD6P30203 668 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 NPTX2P47972 431 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SELENOPP49908 381 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 RENBPP51606 427 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRKG1Q13976 671 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 E2F2Q14209 437 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SPARCL1Q14515 664 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 FAXCQ5TGI0 409 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 CRTC1Q6UUV9 634 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 Q6ZSN1 163 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 RFX8Q6ZV50 586 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 GATAD2AQ86YP4 633 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 COLGALT2Q8IYK4 626 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 PAF1Q8N7H5 531 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 IPO4Q8TEX9 1081 aaKnown RBP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 TMEM125Q96AQ2 219 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF668Q96K58 619 aaPredicted RBP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 NELL2Q99435 816 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 NAP1L4Q99733 375 aaKnown RBP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SMOC2Q9H3U7 446 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 TMOD4Q9NZQ9 345 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 CHST2Q9Y4C5 530 aa6.37□□□□□ -1.39
RNU6-40P-201ENST00000384254 SPATA31A3Q5VYP0 1347 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 A0A1W2PS29 197 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 LGALS16A8MUM7 142 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 CCNT2O60583 730 aaKnown RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 SRGAP2O75044 1071 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 CFIP05156 583 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 EGR1P18146 543 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PPIFP30405 207 aaKnown RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRKAR1BP31321 381 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 TOB1P50616 345 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 DGKEP52429 567 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF134P52741 427 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 CXADRP78310 365 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 MC2RQ01718 297 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 DYRK1AQ13627 763 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 HLXQ14774 488 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRKD1Q15139 912 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 RABL3Q5HYI8 236 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ARHGAP40Q5TG30 622 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 MRNIPQ6NTE8 343 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ARMC6Q6NXE6 501 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF280BQ86YH2 543 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 SLC15A3Q8IY34 581 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 FAM71BQ8TC56 605 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF384Q8TF68 577 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PRPF18Q99633 342 aaKnown RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 SSBP3Q9BWW4 388 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 SLC46A2Q9BY10 475 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 PCDHAC1Q9H158 963 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZBTB26Q9HCK0 441 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
RNU6-40P-201ENST00000384254 A0A0B4J269 797 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 PIP5K1BO14986 540 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 NPC1O15118 1278 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 FGAP02671 866 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 HSD3B1P14060 373 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 PAX3P23760 479 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 ACRV1P26436 265 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 ATICP31939 592 aa6.35□□□□□ -1.39
RNU6-40P-201ENST00000384254 MYO1EQ12965 1108 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms