RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 VTNP04004 478 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 CSF1RP07333 972 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 KLRC2P26717 231 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 FAM71DQ8N9W8 422 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 UTP15Q8TED0 518 aaKnown RBP12.91□□□□□ -0.34
CHD3-203ENST00000380358 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 IPPQ9Y573 584 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 PCDHA10Q9Y5I2 948 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 CBX4O00257 560 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 USP1O94782 785 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 SUPT7LO94864 414 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 EFEMP1Q12805 493 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 EPS8Q12929 822 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 MTFR1Q15390 333 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 C3orf62Q6ZUJ4 267 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 DENND6AQ8IWF6 608 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 FBXO32Q969P5 355 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
CHD3-203ENST00000380358 GH1P01241 217 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 ITGB3P05106 788 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 PTK7Q13308 1070 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 SGCGQ13326 291 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 MTHFD1LQ6UB35 978 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 CELF1Q92879 486 aaKnown RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 IL17RAQ96F46 866 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 S100A13Q99584 98 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 B3GAT3O94766 335 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 EPHB2P29323 1055 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 DYNC1I2Q13409 638 aaKnown RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 CHI3L2Q15782 390 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 KYNUQ16719 465 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 CARD9Q9H257 536 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 TEX14Q8IWB6 1497 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 M0QYT0 321 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 SFNP31947 248 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 ZNF618Q5T7W0 954 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 MARK2Q7KZI7 788 aaKnown RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 ZNF669Q96BR6 464 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 WNT8AQ9H1J5 351 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 MIEF1Q9NQG6 463 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 CLTBP09497 229 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 AGPAT1Q99943 283 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 MYOCQ99972 504 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 DYTNA2CJ06 578 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 ADSLP30566 484 aaPredicted RBP12.9□□□□□ -0.34
CHD3-203ENST00000380358 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 RNFT2Q96EX2 444 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 RAD21L1Q9H4I0 556 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
CHD3-203ENST00000380358 ACSL4O60488 711 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.35
CHD3-203ENST00000380358 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.35
CHD3-203ENST00000380358 MAPK10P53779 464 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.35
CHD3-203ENST00000380358 STX4Q12846 297 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 ACOX1Q15067 660 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 ZC2HC1CQ53FD0 456 aaPredicted RBP12.9□□□□□ -0.35
CHD3-203ENST00000380358 ARMC4Q5T2S8 1044 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 OR2W6PQ8NHA6 318 aa12.9□□□□□ -0.35
CHD3-203ENST00000380358 SENP6Q9GZR1 1112 aaPredicted RBP12.9□□□□□ -0.35
CHD3-203ENST00000380358 SERPINB1P30740 379 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 C16orf59Q7L2K0 433 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 STAMBPL1Q96FJ0 436 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 ACOX2Q99424 681 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 SESN1Q9Y6P5 492 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 CTSEP14091 401 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 ZNF23P17027 643 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 LBPP18428 481 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 MAPKAPK2P49137 400 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 TIGD7Q6NT04 549 aaPredicted RBP12.89□□□□□ -0.35
CHD3-203ENST00000380358 SAMD7Q7Z3H4 446 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 UCMAQ8WVF2 138 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 STK33Q9BYT3 514 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 UTYO14607 1347 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 NDUFS2O75306 463 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 AP1G2O75843 785 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 ALBP02768 609 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 SV2CQ496J9 727 aa12.89□□□□□ -0.35
CHD3-203ENST00000380358 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms