RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 AP1ARQ63HQ0 302 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 MTHFD1LQ6UB35 978 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 PPP4R1Q8TF05 950 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 DHX38Q92620 1227 aaKnown RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 DUSP10Q9Y6W6 482 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 OGTO15294 1046 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MSH4O15457 936 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ALPPL2P10696 532 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 LHX1P48742 406 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 POLR2FP61218 127 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 USP4Q13107 963 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MDH1BQ5I0G3 518 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FAM102AQ5T9C2 384 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 C8orf74Q6P047 294 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MPZL3Q6UWV2 235 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 B4GALNT4Q76KP1 1039 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SZRD1Q7Z422 152 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FSD1LQ9BXM9 530 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ANKZF1Q9H8Y5 726 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 PLEKHA5Q9HAU0 1116 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MED4Q9NPJ6 270 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 STK39Q9UEW8 545 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 AHDC1Q5TGY3 1603 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 RGPD5Q99666 1765 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CPED1A4D0V7 1026 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 OPA1O60313 960 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SNX2O60749 519 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FKBP3Q00688 224 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 EIF2B5Q13144 721 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 NCOA4Q13772 614 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SIM2Q14190 667 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 RABGAP1LQ5R372 815 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 NT5DC1Q5TFE4 455 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FAM43BQ6ZT52 329 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 EFCAB3Q8N7B9 438 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ATP6V0D2Q8N8Y2 350 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FAM133AQ8N9E0 248 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ACDQ96AP0 544 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 THOC1Q96FV9 657 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 LRCH3Q96II8 777 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FAM81BQ96LP2 452 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 NUP58Q9BVL2 599 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 R3HDMLQ9H3Y0 253 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 EXO5Q9H790 373 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 AGO4Q9HCK5 861 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 DNAJC17Q9NVM6 304 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 NUDT5Q9UKK9 219 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ADAMTS3O15072 1205 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CXCL8P10145 99 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CCNE1P24864 410 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 TUBB4BP68371 445 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 COG7P83436 770 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SMAD3P84022 425 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 GFPT1Q06210 699 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 STK4Q13043 487 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 GRM2Q14416 872 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 GRB14Q14449 540 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 KCTD19Q17RG1 926 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 LRRC26Q2I0M4 334 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 TJAP1Q5JTD0 557 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 BEND6Q5SZJ8 279 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SFMBT2Q5VUG0 894 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ANKRD40Q6AI12 368 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 FUT10Q6P4F1 479 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 GRASPQ7Z6J2 395 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 KLHL7Q8IXQ5 586 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ADSSL1Q8N142 457 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SIX5Q8N196 739 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ATP11CQ8NB49 1132 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 HSPH1Q92598 858 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CFAP57Q96MR6 1250 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 YIPF3Q9GZM5 350 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 UMODL1Q5DID0 1318 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CBX4O00257 560 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 EPHX1P07099 455 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CYP11B2P19099 503 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 BRCC3P46736 316 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 VPS41P49754 854 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 RCAN1P53805 252 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SATB1Q01826 763 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ITIH3Q06033 890 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 PHKG1Q16816 387 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SYTL3Q4VX76 610 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 DCAF6Q58WW2 860 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 ARL6IP4Q66PJ3 421 aaKnown RBP6.86□□□□□ -1.31
NEDD9-202ENST00000379446 UBL4BQ8N7F7 174 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 GPR152Q8TDT2 470 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 DZANK1Q9NVP4 752 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 BARX2Q9UMQ3 279 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms