RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SDC4P31431 198 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ABRQ12979 859 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CPNE1Q99829 537 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 OSBPL11Q9BXB4 747 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ECT2Q9H8V3 914 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 MYMKA6NI61 221 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GALNT1Q10472 559 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SIX6OS1Q8N1H7 587 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RBM15BQ8NDT2 890 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 WDR18Q9BV38 432 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SCN3BQ9NY72 215 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ZFATQ9P243 1243 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TRAP1Q12931 704 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ATAD3AQ9NVI7 634 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RAB26Q9ULW5 256 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 DEPDC5O75140 1603 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 A0A087X0T9 212 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 FAM228BP0C875 321 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RP9Q8TA86 221 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 HEXDCQ8WVB3 486 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MIEF2Q96C03 454 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM9Q9P0T7 183 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 HMBSP08397 361 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 DPF2Q92785 391 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PLOD1Q02809 727 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SUSD4Q5VX71 490 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ITPKCQ96DU7 683 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 THAP11Q96EK4 314 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF184Q99676 751 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ZNRF3Q9ULT6 936 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 KLHL33A6NCF5 533 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 EPOP01588 193 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CARSP49589 748 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NCOA4Q13772 614 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 BTBD6Q96KE9 485 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RASSF9O75901 435 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ABCB4P21439 1286 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RENBPP51606 427 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ZC3H3Q8IXZ2 948 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TTLL6Q8N841 843 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 INPP4AQ96PE3 977 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 APOC4-APOC2K7ER74 178 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RIPK2O43353 540 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PARNO95453 639 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 APOC2P02655 101 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TPBGLP0DKB5 382 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GOLGA8FQ08AF8 430 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GOLGA8DPQ0D2H9 430 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 BEND5Q7L4P6 421 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ITGA11Q9UKX5 1188 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TBX20Q9UMR3 447 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CSADQ9Y600 493 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CYP1A1P04798 512 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NUP93Q8N1F7 819 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PIGSQ96S52 555 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MXRA8Q9BRK3 442 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SEC14L4Q9UDX3 406 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CAPN9O14815 690 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SERPINE1P05121 402 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PSMD6Q15008 389 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 R3HDM1Q15032 1099 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM114B3SHH9 223 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NDUFS2O75306 463 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 FAM91A1Q658Y4 838 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CNTD1Q8N815 330 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GALNT6Q8NCL4 622 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TUBA1CQ9BQE3 449 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NT5C1AQ9BXI3 368 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NFKBIZQ9BYH8 718 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TCP11X1B4DZS4 312 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 OGTO15294 1046 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CABYRO75952 493 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 YWHABP31946 246 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MCCD1P59942 119 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MGAT5Q09328 741 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 RSBN1LQ6PCB5 846 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D16Q8TBP0 767 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 E2F7Q96AV8 911 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ENTPD7Q9NQZ7 604 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 WBP11Q9Y2W2 641 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 C2CD2Q9Y426 696 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GLRA3O75311 464 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CRHR1P34998 444 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CASC4Q6P4E1 433 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 IL22Q9GZX6 179 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TAGLN3Q9UI15 199 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 IFNB1P01574 187 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PROSER3Q2NL68 480 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ASTE1Q2TB18 679 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MAFFQ9ULX9 164 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NFASCO94856 1347 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GFPT1Q06210 699 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 DCTN2Q13561 401 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 LVRNQ6Q4G3 990 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PGBD4Q96DM1 585 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PARVBQ9HBI1 364 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 THUMPD1Q9NXG2 353 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PPIBP23284 216 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms