RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 FGBP02675 491 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 KRT7P08729 469 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 RHBDL3P58872 404 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 HS6ST3Q8IZP7 471 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 OSMRQ99650 979 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CCDC90BQ9GZT6 254 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TBX3O15119 743 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 EFCAB14O75071 495 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 FGFR4P22455 802 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 GPC5P78333 572 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CDKL3Q8IVW4 592 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF564Q8TBZ8 553 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 TRPV2Q9Y5S1 764 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 POMCP01189 267 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 KRT14P02533 472 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 UCHL3P15374 230 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 MAPK9P45984 424 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 DAB2P98082 770 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 MAP2K5Q13163 448 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 NCOA4Q13772 614 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SPATA4Q8NEY3 305 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 CASS4Q9NQ75 786 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 IP6K2Q9UHH9 426 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
HIF3A-205ENST00000377670 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 ANP32DO95626 131 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 FLT3LGP49771 235 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.6
HIF3A-205ENST00000377670 PLCL1Q15111 1095 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 C2CD6Q53TS8 623 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 GIPC2Q8TF65 315 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.6
HIF3A-205ENST00000377670 GPR63Q9BZJ6 419 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 HPSEQ9Y251 543 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 RNF103-CHMP3A0A140T963 221 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.6
HIF3A-205ENST00000377670 NEK2P51955 445 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 FRMD5Q7Z6J6 570 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 CD302Q8IX05 232 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 STAMBPL1Q96FJ0 436 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 RMDN2Q96LZ7 410 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 DPP3Q9NY33 737 aa11.27□□□□□ -0.6
HIF3A-205ENST00000377670 PGK1P00558 417 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 FMO5P49326 533 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 LONP2Q86WA8 852 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 RASSF3Q86WH2 238 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 TMCO5AQ8N6Q1 288 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 KIAA1683Q9H0B3 1180 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 MIR1-1HGQ9H1L0 117 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 ADA2Q9NZK5 511 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 CASTOR2A6NHX0 329 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.61
HIF3A-205ENST00000377670 PRMT2P55345 433 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 CYTH1Q15438 398 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 KLHL38Q2WGJ6 581 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 ACAD11Q709F0 780 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 NCLNQ969V3 563 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 DTNBP1Q96EV8 351 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 HPDLQ96IR7 371 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 FAM118BQ9BPY3 351 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 CINPQ9BW66 212 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-205ENST00000377670 ANKEF1Q9NU02 776 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 CYB561D2O14569 222 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 E2F6O75461 281 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 CHN1P15882 459 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-205ENST00000377670 MDH1BQ5I0G3 518 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 PID1Q7Z2X4 250 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 MIB1Q86YT6 1006 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 ARL8AQ96BM9 186 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
HIF3A-205ENST00000377670 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 A0A1W2PQC6 194 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 FAM86B1E9PN63 330 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 FAM86B2P0C5J1 330 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 KCNA3P22001 575 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 HNRNPH1P31943 449 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms