RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZWINTO95229 277 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 LSM8O95777 96 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ABCD1P33897 745 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 FSTL1Q12841 308 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 TAF11Q15544 211 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 PPIL6Q8IXY8 311 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 KIAA0319LQ8IZA0 1049 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 RTKN2Q8IZC4 609 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 FBXO36Q8NEA4 188 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 FAM167BQ9BTA0 163 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 DHRS4Q9BTZ2 278 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 CYP39A1Q9NYL5 469 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 C2CD2LO14523 706 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 TPBGLP0DKB5 382 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 CALB2P22676 271 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 PSMA2P25787 234 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 CAPSQ13938 189 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 CTC1Q2NKJ3 1217 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 CLNKQ7Z7G1 428 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 BRSK2Q8IWQ3 736 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 NIPA2Q8N8Q9 360 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 SIP14410 1827 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 H0Y3Z8 333 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 ENTPD5O75356 428 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 LRCH4O75427 683 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 RAD23BP54727 409 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 ARL4CP56559 192 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 PTPN20Q4JDL3 420 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 SLC45A4Q5BKX6 768 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 DENND1BQ6P3S1 775 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 UNC45BQ8IWX7 931 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 MIPEPQ99797 713 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 DENND2DQ9H6A0 471 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-202ENST00000376839 ACSS3Q9H6R3 686 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 PPCSQ9HAB8 311 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-202ENST00000376839 UTRNP46939 3433 aa13.88□□□□□ -0.19
ACTN1-202ENST00000376839 FAM189A1O60320 539 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 NIM1KQ8IY84 436 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 CDHR1Q96JP9 859 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 TRIM6Q9C030 488 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-202ENST00000376839 NIF3L1Q9GZT8 377 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
ACTN1-202ENST00000376839 CYTH4Q9UIA0 394 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 NEBLO76041 1014 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 PHBP35232 272 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 FYB2Q5VWT5 728 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 IGDCC3Q8IVU1 814 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 EMC1Q8N766 993 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 BANPQ8N9N5 519 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 NAF1Q96HR8 494 aaKnown RBP13.87□□□□□ -0.19
ACTN1-202ENST00000376839 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
ACTN1-202ENST00000376839 TRAFD1O14545 582 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 STAM2O75886 525 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 SMNDC1O75940 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 BACE1P56817 501 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 TAF5Q15542 800 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 SEPT7Q16181 437 aaKnown RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 TRIM68Q6AZZ1 485 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 RFWD3Q6PCD5 774 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 BBS12Q6ZW61 710 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 PCGF5Q86SE9 256 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 LRRC6Q86X45 466 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 WDR49Q8IV35 697 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 KCNN1Q92952 543 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 PRR11Q96HE9 360 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 CHMP2BQ9UQN3 213 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 RLFQ13129 1914 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 A0A0G2JND7 137 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 E7ESA3 106 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 PTPN4P29074 926 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 HMGCS2P54868 508 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 TAP1Q03518 808 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 POLNQ7Z5Q5 900 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 FAM71DQ8N9W8 422 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 MICAL1Q8TDZ2 1067 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms