RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PCDHA7Q9UN72 937 aa22.56■■□□□ 1.2
VSX1-201ENST00000376707 SPTBN4Q9H254 2564 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 POLR2DO15514 142 aaKnown RBP22.55■■□□□ 1.2
VSX1-201ENST00000376707 HCRTO43612 131 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 TDGF1P13385 188 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 SATB1Q01826 763 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 GAS6Q14393 721 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 PON2Q15165 354 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 CCDC142Q17RM4 750 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 CFAP221Q4G0U5 840 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 RESP18Q5W5W9 173 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 UNC13DQ70J99 1090 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 MON1AQ86VX9 555 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 SCN4BQ8IWT1 228 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 RDH13Q8NBN7 331 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 USP13Q92995 863 aaPredicted RBP22.55■■□□□ 1.2
VSX1-201ENST00000376707 FUBP3Q96I24 572 aaKnown RBP eCLIP22.55■■□□□ 1.2
VSX1-201ENST00000376707 KIF9Q9HAQ2 790 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 AGPAT3Q9NRZ7 376 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 GKN1Q9NS71 199 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 TDP1Q9NUW8 608 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 FAM13BQ9NYF5 915 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 RCOR1Q9UKL0 485 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 CCL26Q9Y258 94 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 UBE4BO95155 1302 aa22.55■■□□□ 1.2
VSX1-201ENST00000376707 SOBPA7XYQ1 873 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 NOL4O94818 638 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 DLATP10515 647 aaKnown RBP22.54■■□□□ 1.2
VSX1-201ENST00000376707 ME1P48163 572 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 CYP2J2P51589 502 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 SNRNP35Q16560 246 aaKnown RBP22.54■■□□□ 1.2
VSX1-201ENST00000376707 C4orf50Q6ZRC1 276 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 Q6ZS52 159 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 HS2ST1Q7LGA3 356 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 NELFCDQ8IXH7 590 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 RMDN1Q96DB5 314 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 TRMT2BQ96GJ1 504 aaKnown RBP22.54■■□□□ 1.2
VSX1-201ENST00000376707 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 SYT15Q9BQS2 421 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 BLZF1Q9H2G9 400 aa22.54■■□□□ 1.2
VSX1-201ENST00000376707 ZNF292O60281 2723 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 CLIC2O15247 247 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 TGFB1I1O43294 461 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 TNNI1P19237 187 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 DNM1Q05193 864 aaKnown RBP22.53■■□□□ 1.2
VSX1-201ENST00000376707 EHHADHQ08426 723 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 CC2D1AQ6P1N0 951 aaPredicted RBP22.53■■□□□ 1.2
VSX1-201ENST00000376707 TRAPPC11Q7Z392 1133 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 SPRYD3Q8NCJ5 442 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 KBTBD7Q8WVZ9 684 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 MMS19Q96T76 1030 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 CDH9Q9ULB4 789 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 RAB23Q9ULC3 237 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 OTOGLQ3ZCN5 2332 aa22.53■■□□□ 1.2
VSX1-201ENST00000376707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 ATP2C2O75185 946 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 CASP1P29466 404 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 PSMC1P62191 440 aaKnown RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 SNRPFP62306 86 aaKnown RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 RUNX3Q13761 415 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 MAPRE1Q15691 268 aaKnown RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 WDR44Q5JSH3 913 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 FAM171BQ6P995 826 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 LIMS2Q7Z4I7 341 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 GPR161Q8N6U8 529 aaKnown RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 XXYLT1Q8NBI6 393 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 SCFD1Q8WVM8 642 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 CCDC127Q96BQ5 260 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 MYRFLQ96LU7 910 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 FAM83CQ9BQN1 747 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 TRPC7Q9HCX4 862 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 MAGEC2Q9UBF1 373 aaPredicted RBP22.52■■□□□ 1.2
VSX1-201ENST00000376707 GMEB2Q9UKD1 530 aa22.52■■□□□ 1.2
VSX1-201ENST00000376707 TADA3O75528 432 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 WARSP23381 471 aaKnown RBP22.51■■□□□ 1.19
VSX1-201ENST00000376707 LMO2P25791 158 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 MAGEA11P43364 429 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 CCINQ13939 588 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 ZNF268Q14587 947 aaPredicted RBP22.51■■□□□ 1.19
VSX1-201ENST00000376707 PSMD6Q15008 389 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 TRIM68Q6AZZ1 485 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 SYNPOQ8N3V7 929 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 MYLPFQ96A32 169 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 CGRRF1Q99675 332 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 EBF3Q9H4W6 596 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 HPS4Q9NQG7 708 aa22.51■■□□□ 1.19
VSX1-201ENST00000376707 PAPSS2O95340 614 aaPredicted RBP22.5■■□□□ 1.19
VSX1-201ENST00000376707 CKMP06732 381 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 PDGFRBP09619 1106 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 AFMP43652 599 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 CYP27A1Q02318 531 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 CYP24A1Q07973 514 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 VSTM1Q6UX27 236 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 CEP57L1Q8IYX8 460 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 FSIP1Q8NA03 581 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 TTC16Q8NEE8 873 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 SNX25Q9H3E2 840 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 SLC39A2Q9NP94 309 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 CRTAC1Q9NQ79 661 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 GPR179Q6PRD1 2367 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms