RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 SMYD2Q9NRG4 433 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 KIF28PB7ZC32 967 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 S100A2P29034 98 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 LMBR1LQ6UX01 489 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 MLXIPLQ9NP71 852 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PCDHB4Q9Y5E5 795 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ESYT3A0FGR9 886 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 MROH9Q5TGP6 573 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 C8orf59Q8N0T1 100 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 ASAP3Q8TDY4 903 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CENPIQ92674 756 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 C1QTNF1Q9BXJ1 281 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 RBM12Q9NTZ6 932 aaKnown RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 PLAGL2Q9UPG8 496 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ABATP80404 500 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 TBC1D7Q9P0N9 293 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 TBXAS1P24557 533 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 OTUD7BQ6GQQ9 843 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 JARID2Q92833 1246 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 CGREF1Q99674 301 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GCNT4Q9P109 453 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ANAPC7Q9UJX3 599 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 RAD51CO43502 376 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PSMG1O95456 288 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GUCA1CO95843 209 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CD4P01730 458 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CPA1P15085 419 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CRKP46108 304 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 BNIP1Q12981 228 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 TRPV1Q8NER1 839 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 C2orf74A8MZ97 194 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 H3BQF6 201 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 INO80B-WBP1J3KQ70 363 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 RTN2O75298 545 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SASH3O75995 380 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PRKD3O94806 890 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 RHBDF1Q96CC6 855 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GPN1Q9HCN4 374 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 ENTPD7Q9NQZ7 604 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PCDHA4Q9UN74 947 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ARAP1Q96P48 1450 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SPRP35270 261 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 CAMK1Q14012 370 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 DCLK2Q8N568 766 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SUCOQ9UBS9 1254 aaKnown RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 FBXO40Q9UH90 709 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SEPT9Q9UHD8 586 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 CPSF3Q9UKF6 684 aaKnown RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 ERO1BQ86YB8 467 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PPM1KQ8N3J5 372 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CCNYL1Q8N7R7 359 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 KRCC1Q9NPI7 259 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 MED11Q9P086 117 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 KCNJ14Q9UNX9 436 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 B4E1Z4 1266 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 NCAM2O15394 837 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 POU1F1P28069 291 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 TRIM23P36406 574 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GRIK1P39086 918 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 ABL2P42684 1182 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 MAGEA2P43356 314 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GJA9P57773 515 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 NAB1Q13506 487 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 AIFM3Q96NN9 605 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 GRIP2Q9C0E4 1043 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 CUEDC1Q9NWM3 386 aaPredicted RBP6.86□□□□□ -1.31
UBR4-204ENST00000375254 USP19O94966 1318 aa6.86□□□□□ -1.31
UBR4-204ENST00000375254 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TEX46H3BTG2 121 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 REM1O75628 298 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 H6PDO95479 791 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 IFNGR2P38484 337 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 KCNK10P57789 538 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SPIRE1Q08AE8 756 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PDIA5Q14554 519 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ZBED8Q8IZ13 594 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 EID3Q8N140 333 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TUBE1Q9UJT0 475 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NAALADL1Q9UQQ1 740 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 RALGAPBQ86X10 1494 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 BACH1O14867 736 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 HUS1O60921 280 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SEL1L3Q68CR1 1132 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ANKRD13BQ86YJ7 626 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NOA1Q8NC60 698 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 CKAP2Q8WWK9 683 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PTBP2Q9UKA9 531 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 SNX13Q9Y5W8 968 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ZBTB5O15062 677 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 THOP1P52888 689 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PRKG1Q13976 671 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms