RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 C1QBPQ07021 282 aaKnown RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 MMP19Q99542 508 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 ZNF229Q9UJW7 825 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 TNPO2O14787 897 aaKnown RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 TIMM44O43615 452 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 PTK6Q13882 451 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 RBM46Q8TBY0 533 aaKnown RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 OTUD4Q01804 1114 aaKnown RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 MMADHCQ9H3L0 296 aaPredicted RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 SLC34A1Q06495 639 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 LBRQ14739 615 aaKnown RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 FOXR2Q6PJQ5 311 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 CCDC126Q96EE4 140 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 RIC8BQ9NVN3 520 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 TEKT2Q9UIF3 430 aa22.03■■□□□ 1.12
TGFBR1-202ENST00000374994 NUDT2P50583 147 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 SMAD1Q15797 465 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 ADCK1Q86TW2 530 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 ADGRA3Q8IWK6 1321 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 CLEC4FQ8N1N0 589 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 PAPOLBQ9NRJ5 636 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 RPL21P46778 160 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 TERB1Q8NA31 727 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 SLC20A1Q8WUM9 679 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 TARS2Q9BW92 718 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 KLHL4Q9C0H6 718 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 RUBCNLQ9H714 662 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 SERPINB8P50452 374 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 TFB1MQ8WVM0 346 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 SLC10A4Q96EP9 437 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 CBWD1Q9BRT8 395 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 AVENQ9NQS1 362 aaPredicted RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 DIP2BQ9P265 1576 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 VCPP55072 806 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 NUP107P57740 925 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 PDAP1Q13442 181 aaKnown RBP22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 OLFML2BQ68BL8 750 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 HOMEZQ8IX15 550 aa22.02■■□□□ 1.12
TGFBR1-202ENST00000374994 SDR42E2A6NKP2 422 aa22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 DDX3XO00571 662 aaKnown RBP eCLIP22.02■■□□□ 1.114e-12■■■■■ 74.6
TGFBR1-202ENST00000374994 DNALI1O14645 258 aaPredicted RBP22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 HNRNPH3P31942 346 aaKnown RBP22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 CGRRF1Q99675 332 aa22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 SARS2Q9NP81 518 aaKnown RBP22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 TMEM51Q9NW97 253 aa22.02■■□□□ 1.11
TGFBR1-202ENST00000374994 AQP5P55064 265 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 MTMR2Q13614 643 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 BNC2Q6ZN30 1099 aaPredicted RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 TNIP2Q8NFZ5 429 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 CYGBQ8WWM9 190 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 PPP2R3CQ969Q6 453 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 ACTL7BQ9Y614 415 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 MOCS2O96007 188 aaPredicted RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 MYL3P08590 195 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 DDX5P17844 614 aaKnown RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 BTBD10Q9BSF8 475 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 KANSL1LA0AUZ9 987 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 HMOX2P30519 316 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 IRGCQ6NXR0 463 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 TTC33Q6PID6 262 aaPredicted RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 GMCL1P1Q8NEA9 526 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 PPP1R36Q96LQ0 422 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 BLOC1S4Q9NUP1 217 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 ICAM1P05362 532 aa22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 TXNP10599 105 aaKnown RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 TRIM45Q9H8W5 580 aaPredicted RBP22.01■■□□□ 1.11
TGFBR1-202ENST00000374994 TLR2O60603 784 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 KCNK10P57789 538 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 PREPLQ4J6C6 727 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 COG4Q9H9E3 785 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 VWDEQ8N2E2 1590 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 TSPOAP1O95153 1857 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 OGTO15294 1046 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 HMGCS2P54868 508 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 KCNA1Q09470 495 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 STK32AQ8WU08 396 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 BEGAINQ9BUH8 593 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 ZNF70Q9UC06 446 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 PCDHGB4Q9UN71 923 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 SUPT3HO75486 399 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 PYGLP06737 847 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 RECQLP46063 649 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 ELF3P78545 371 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 FAM83EQ2M2I3 478 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 PDE2AO00408 941 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 ZNF197O14709 1029 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 ITGB3BPQ13352 177 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 IZUMO2Q6UXV1 221 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 ZNF668Q96K58 619 aaPredicted RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 SLC39A10Q9ULF5 831 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 AMPD2Q01433 879 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 GCNT1Q02742 428 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 C10orf88Q9H8K7 445 aa22■■□□□ 1.11
TGFBR1-202ENST00000374994 OLA1Q9NTK5 396 aaKnown RBP22■■□□□ 1.11
TGFBR1-202ENST00000374994 SOX13Q9UN79 622 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms