RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 SIK2Q9H0K1 926 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 UTRNP46939 3433 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 P4HA2O15460 535 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 DDNO94850 711 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 MOCS2O96007 188 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 VCPP55072 806 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 PIGHQ14442 188 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 URGCPQ8TCY9 931 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 RAET1EQ8TD07 263 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 GANCQ8TET4 914 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 TASP1Q9H6P5 420 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CHMP2BQ9UQN3 213 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CDY2AQ9Y6F7 541 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
NPLOC4-202ENST00000374747 CXCL11O14625 94 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 DSG3P32926 999 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 TPI1P60174 286 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 AASDHQ4L235 1098 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 B4GALNT2Q8NHY0 566 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 ARP10275 920 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CYP2B6P20813 491 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 OAZ1P54368 228 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 DSG1Q02413 1049 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CRYMQ14894 314 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SYCP2LQ5T4T6 812 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 IFNEQ86WN2 208 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SYTL5Q8TDW5 730 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 GRID1Q9ULK0 1009 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SPRP35270 261 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 ITGA8P53708 1063 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 NPEPPSP55786 919 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CDK17Q00537 523 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CENPCQ03188 943 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 BTKQ06187 659 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 C3orf62Q6ZUJ4 267 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CPA5Q8WXQ8 436 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 KRT35Q92764 455 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 E2F7Q96AV8 911 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SERPINB12Q96P63 405 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 FAM32AQ9Y421 112 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 RRN3P2A6NIE6 340 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PRR23D1E9PI22 279 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PRR23D2P0DMB1 279 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 EVX2Q03828 476 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 ZNF556Q9HAH1 456 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PLEKHA5Q9HAU0 1116 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 SCN3BQ9NY72 215 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 PAK5Q9P286 719 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
NPLOC4-202ENST00000374747 TLR2O60603 784 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 OCM2P0CE71 109 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 OCMP0CE72 109 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 HSD17B3P37058 310 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 DGKDQ16760 1214 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 RFWD2Q8NHY2 731 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 AFG1LQ8WV93 481 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 SPON2Q9BUD6 331 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 E7ENQ6 273 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ITIH4Q14624 930 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PLEKHM3Q6ZWE6 761 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 ARHGEF38Q9NXL2 777 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 NDUFA13Q9P0J0 144 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 MOSPD1Q9UJG1 213 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 LRRIQ3A6PVS8 624 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 NFIBO00712 420 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 C6orf222P0C671 652 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 LCP1P13796 627 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 TCN1P20061 433 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 COMTP21964 271 aa12.78□□□□□ -0.36
NPLOC4-202ENST00000374747 TCF7P36402 384 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms