RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 PRPF38BQ5VTL8 546 aaKnown RBP13.6□□□□□ -0.23
GJB1-202ENST00000374022 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 CYP26C1Q6V0L0 522 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 LRRTM3Q86VH5 581 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 TMEM139Q8IV31 216 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 DCP1BQ8IZD4 617 aaKnown RBP13.6□□□□□ -0.23
GJB1-202ENST00000374022 CCDC112Q8NEF3 446 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 MYLPFQ96A32 169 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 PCED1BQ96HM7 432 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 AGPAT1Q99943 283 aa13.6□□□□□ -0.23
GJB1-202ENST00000374022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.6□□□□□ -0.23
GJB1-202ENST00000374022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 ADAM12O43184 909 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 LILRB3O75022 631 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 CPB1P15086 417 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 EIF4A3P38919 411 aaKnown RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 ARPP19P56211 112 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 FMO1Q01740 532 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 CREMQ03060 361 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 BMS1Q14692 1282 aaKnown RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 STILQ15468 1287 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 PLPP4Q5VZY2 271 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 SLC8B1Q6J4K2 584 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 TMTC1Q8IUR5 882 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 FUKQ8N0W3 1084 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 SLC2A14Q8TDB8 520 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 CLSTN3Q9BQT9 956 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 NHEJ1Q9H9Q4 299 aaPredicted RBP13.59□□□□□ -0.23
GJB1-202ENST00000374022 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 TSPAN16Q9UKR8 245 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
GJB1-202ENST00000374022 GREB1Q4ZG55 1949 aa13.59□□□□□ -0.23
GJB1-202ENST00000374022 MICAL2O94851 1124 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CXCL14O95715 111 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CFHP08603 1231 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 ADORA2BP29275 332 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 OR1D2P34982 312 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CDR1P51861 262 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 ROR1Q01973 937 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CYP27A1Q02318 531 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CAMK1Q14012 370 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 CNGA2Q16280 664 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.23
GJB1-202ENST00000374022 GOLGA7BQ2TAP0 167 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 C4orf50Q6ZRC1 276 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 VPS36Q86VN1 386 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 OLIG1Q8TAK6 271 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 HNRNPABQ99729 332 aaKnown RBP13.58□□□□□ -0.23
GJB1-202ENST00000374022 MED10Q9BTT4 135 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 DEF6Q9H4E7 631 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.23
GJB1-202ENST00000374022 FNIP2Q9P278 1114 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 IRAK3Q9Y616 596 aa13.58□□□□□ -0.23
GJB1-202ENST00000374022 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.23
GJB1-202ENST00000374022 EPOPA6NHQ4 379 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 SOWAHDA6NJG2 315 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 CLDN5O00501 218 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 FSCN2O14926 492 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 NDUFV1P49821 464 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 CCZ1BP86790 482 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
GJB1-202ENST00000374022 GPR17Q13304 367 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 LCLAT1Q6UWP7 414 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 FAM35AQ86V20 835 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 CCDC42Q96M95 316 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
GJB1-202ENST00000374022 ZNF518BQ9C0D4 1074 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 LMAN2LQ9H0V9 348 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
GJB1-202ENST00000374022 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 ATP8B3O60423 1300 aa13.58□□□□□ -0.24
GJB1-202ENST00000374022 MYO16Q9Y6X6 1858 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 WDR27A2RRH5 827 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 M0QYV0 167 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 TEX28O15482 410 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 CTIFO43310 598 aaKnown RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 ANXA13P27216 316 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 IRS1P35568 1242 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 KIF11P52732 1056 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 SMARCB1Q12824 385 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 ASTE1Q2TB18 679 aaPredicted RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 DENND1BQ6P3S1 775 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms