RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PSAPP07602 524 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 WEE2P0C1S8 567 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 DNAJB2P25686 324 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 NSFP46459 744 aaKnown RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 ZNF280AP59817 542 aaPredicted RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 NOMO3P69849 1222 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 MAMLD1Q13495 774 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 ZKSCAN8Q15776 578 aaPredicted RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 PUS10Q3MIT2 529 aaKnown RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 ZNF568Q3ZCX4 644 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 SCYL3Q8IZE3 742 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 ANKRD42Q8N9B4 389 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 ATP6V0A1Q93050 837 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 THOC1Q96FV9 657 aaKnown RBP6.75□□□□□ -1.33
CHD6-202ENST00000373222 CABS1Q96KC9 395 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 MSTO1Q9BUK6 570 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 FAM129AQ9BZQ8 928 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 DCLK3Q9C098 648 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 MTMR12Q9C0I1 747 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 LRRC19Q9H756 370 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 CD248Q9HCU0 757 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 HAUS2Q9NVX0 235 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 UVRAGQ9P2Y5 699 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 MSRB2Q9Y3D2 182 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 PASKQ96RG2 1323 aa6.75□□□□□ -1.33
CHD6-202ENST00000373222 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 K7ERI5 159 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PMM2O15305 246 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 THAP12O43422 761 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 EXTL3O43909 919 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CYP1A1P04798 512 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 PAEPP09466 180 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SUPT20HL2P0C7V6 817 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SRGAP2CP0DJJ0 459 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ATF7P17544 494 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 RAP1GAPP47736 663 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CDR1P51861 262 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 DRG2P55039 364 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 NOP14P78316 857 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 GCNT1Q02742 428 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CENPCQ03188 943 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PTP4A2Q12974 167 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 KLF1Q13351 362 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 CUL2Q13617 745 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CAPSQ13938 189 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 LY6KQ17RY6 165 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SMTNL2Q2TAL5 461 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SUPT20HL1Q3ZLR7 823 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CYP4F22Q6NT55 531 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 RHBDF2Q6PJF5 856 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 VSTM1Q6UX27 236 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TMEM192Q8IY95 271 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ARFGAP2Q8N6H7 521 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TEX19Q8NA77 164 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 RBBP8NLQ8NC74 664 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 IFT74Q96LB3 600 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 IWS1Q96ST2 819 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ELAC2Q9BQ52 826 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 KIF9Q9HAQ2 790 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ABCF3Q9NUQ8 709 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.74□□□□□ -1.33
CHD6-202ENST00000373222 GGA3Q9NZ52 723 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ADAM22Q9P0K1 906 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 BTBD7Q9P203 1132 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PCDHB2Q9Y5E7 798 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CNTNAP2Q9UHC6 1331 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 SPATA31C2B4DYI2 1134 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 GOLGA8SH3BPF8 625 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 GOLGA8MH3BSY2 632 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PODXLO00592 558 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TLR3O15455 904 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 B4GALT5O43286 388 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 AKAP10O43572 662 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ARIH2O95376 493 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PGK2P07205 417 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 MYL3P08590 195 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 VIMP08670 466 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 RARGP13631 454 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 UBA1P22314 1058 aaKnown RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 GTF2H1P32780 548 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ADCY8P40145 1251 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 MYL6P60660 151 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ACTN3Q08043 901 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 CALCOCO2Q13137 446 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TNFAIP1Q13829 316 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 RAB6CQ53S08 254 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 ANKRD20A8PQ5CZ79 823 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TAX1BP1Q86VP1 789 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 C12orf50Q8NA57 414 aaPredicted RBP6.74□□□□□ -1.33
CHD6-202ENST00000373222 TFAP2BQ92481 460 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 COL26A1Q96A83 441 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 CHMP6Q96FZ7 201 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 PGM2Q96G03 612 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 MCEEQ96PE7 176 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 TEX13BQ9BXU2 312 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 RAB6CQ9H0N0 254 aa6.74□□□□□ -1.33
CHD6-202ENST00000373222 IFT122Q9HBG6 1241 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms