RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 HMGA1P17096 107 aaKnown RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 PFKLP17858 780 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 ACAT1P24752 427 aaKnown RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 ANXA13P27216 316 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 ZNF268Q14587 947 aaPredicted RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 STXBP5Q5T5C0 1151 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 PKMYT1Q99640 499 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 NDRG2Q9UN36 371 aaKnown RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 MAGED2Q9UNF1 606 aaPredicted RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 HPSEQ9Y251 543 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 A0A1B0GVL5 298 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 A0A1W2PQ27 194 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 A0A1W2PQ64 194 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 A0A1W2PQD8 194 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 NRG2O14511 850 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 TRIM66O15016 1216 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CALUO43852 315 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 LRRN2O75325 713 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 F11P03951 625 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 TRIM21P19474 475 aaKnown RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CYP2F1P24903 491 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 GNL1P36915 607 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 PPP3CCP48454 512 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CCR3P51677 355 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CYP4F8P98187 520 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 BECN1Q14457 450 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 KMT5BQ4FZB7 885 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 DGKKQ5KSL6 1271 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CC2D1AQ6P1N0 951 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 ATRIPQ8WXE1 791 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 SPATA17Q96L03 361 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 SLC46A2Q9BY10 475 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 CHRDQ9H2X0 955 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 TDP1Q9NUW8 608 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 FRMD4BQ9Y2L6 1034 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 PTPRJQ12913 1337 aa20.2■□□□□ 0.82
TMEM53-201ENST00000372235 NUP210Q8TEM1 1887 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-201ENST00000372235 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 MYBPHLA2RUH7 354 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 KLRC4O43908 158 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 P4HA1P13674 534 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 CCNE1P24864 410 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 CASP1P29466 404 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 CSTF1Q05048 431 aaKnown RBP20.19■□□□□ 0.82
TMEM53-201ENST00000372235 DDR2Q16832 855 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 OSTM1Q86WC4 334 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 ADSSL1Q8N142 457 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 SYNPOQ8N3V7 929 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 MYCBPAPQ8TBZ2 947 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 KBTBD7Q8WVZ9 684 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 VRTNQ9H8Y1 702 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 LMAN1LQ9HAT1 526 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 ZSCAN32Q9NX65 697 aa20.19■□□□□ 0.82
TMEM53-201ENST00000372235 SLC38A8A6NNN8 435 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 CST3P01034 146 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-201ENST00000372235 RPN1P04843 607 aaKnown RBP20.18■□□□□ 0.82
TMEM53-201ENST00000372235 GRIK1P39086 918 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 CLDN10P78369 228 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 STK4Q13043 487 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 FZD5Q13467 585 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 ITPRIPL2Q3MIP1 535 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 SCN4BQ8IWT1 228 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 MAB21L3Q8N8X9 362 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 OR6B3Q8NGW1 331 aa20.18■□□□□ 0.82
TMEM53-201ENST00000372235 PRMT8Q9NR22 394 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-201ENST00000372235 TRAV19A0A0A6YYK7 116 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 SPECC1L-ADORA2AF8WAN1 911 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 IKBKBO14920 756 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 MAPK13O15264 365 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 USP17L7P0C7H9 530 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 CYP27A1Q02318 531 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 BIRC3Q13489 604 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 TMEM150AQ86TG1 271 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 GRAMD1CQ8IYS0 662 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 MAML2Q8IZL2 1156 aaPredicted RBP20.17■□□□□ 0.82
TMEM53-201ENST00000372235 ZNF687Q8N1G0 1237 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 PARD3BQ8TEW8 1205 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 TAF4BQ92750 862 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 SECISBP2LQ93073 1101 aaKnown RBP20.17■□□□□ 0.82
TMEM53-201ENST00000372235 RSPRY1Q96DX4 576 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 TNIP3Q96KP6 325 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 ELOVL4Q9GZR5 314 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 DNAI2Q9GZS0 605 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 DMAC2Q9NW81 257 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 ATP8B3O60423 1300 aa20.17■□□□□ 0.82
TMEM53-201ENST00000372235 SHISA7A6NL88 538 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 RHOBTB3O94955 611 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 CLSTN1O94985 981 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 PRAMEF12O95522 483 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 PDGFRBP09619 1106 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 CHRNB1P11230 501 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 LMO2P25791 158 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 RPL13P26373 211 aaKnown RBP20.16■□□□□ 0.82
TMEM53-201ENST00000372235 CTHP32929 405 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 FAM160A1Q05DH4 1040 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 ENPEPQ07075 957 aa20.16■□□□□ 0.82
TMEM53-201ENST00000372235 MTAPQ13126 283 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms