RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 C1orf228Q6PIY5 440 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 FAM47EQ6ZV65 393 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TUBA1AQ71U36 451 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 KIAA0907Q7Z7F0 614 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 VSIG1Q86XK7 387 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 DDX42Q86XP3 938 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 ESX1Q8N693 406 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 C7orf43Q8WVR3 580 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 EEF2KMTQ96G04 330 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SEMA6BQ9H3T3 888 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 HAO1Q9UJM8 370 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 STXBP5LQ9Y2K9 1186 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TELO2Q9Y4R8 837 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 PCDHA1Q9Y5I3 950 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 MYH10P35580 1976 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 RGS16O15492 202 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 T-ENOLP0DO92 83 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 POLR2EP19388 210 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 HNRNPH3P31942 346 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 CDKN1CP49918 316 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 DSG1Q02413 1049 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 ZBTB17Q13105 803 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 E2F2Q14209 437 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 LPIN1Q14693 890 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 AOC3Q16853 763 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 VWA3BQ502W6 1294 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 SNRNP48Q6IEG0 339 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 CENPPQ6IPU0 288 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 CCSAPQ6IQ19 270 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 CGB2Q6NT52 195 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 USP17L6PQ6QN14 398 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 TMEM179Q6ZVK1 233 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 KCNK18Q7Z418 384 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 SFR1Q86XK3 245 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 KLHL7Q8IXQ5 586 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 ARHGAP24Q8N264 748 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 CEP70Q8NHQ1 597 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 SCFD2Q8WU76 684 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 GIMAP1Q8WWP7 306 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 MAELQ96JY0 434 aaKnown RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 PRICKLE1Q96MT3 831 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 NOX5Q96PH1 765 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 ECSITQ9BQ95 431 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 TMEM109Q9BVC6 243 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 STMN4Q9H169 189 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-203ENST00000372232 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 AGPAT5Q9NUQ2 364 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 SNX9Q9Y5X1 595 aa9.29□□□□□ -0.92
ATG4A-203ENST00000372232 EML1O00423 815 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 HNRNPCL1O60812 293 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 FBXO21O94952 628 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 PTPN4P29074 926 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CRABP2P29373 138 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 NAA20P61599 178 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 SH3BP2P78314 561 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 IFI35P80217 286 aaPredicted RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 EIF2B5Q13144 721 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 HNRNPDQ14103 355 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 NDUFA5Q16718 116 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CTC1Q2NKJ3 1217 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 ACSBG2Q5FVE4 666 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 C6orf118Q5T5N4 469 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CKAP2Q8WWK9 683 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 GJA10Q969M2 543 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 ANKRD36BP1Q96IX9 119 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CEP295NLQ96MC4 621 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 NAP1L4Q99733 375 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 LRRC27Q9C0I9 530 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 RBM38Q9H0Z9 239 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 AZI2Q9H6S1 392 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 SALL4Q9UJQ4 1053 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 PCDHA12Q9UN75 941 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 A0A1W2PQJ5 194 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 FUOMA2VDF0 154 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 F5H6K3 240 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 AP1G1O43747 822 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 EIF2S1P05198 315 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 UBL4AP11441 157 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 KLRC3Q07444 240 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 MTFR1Q15390 333 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 MIIPQ5JXC2 388 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 KLHDC10Q6PID8 442 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 TAOK1Q7L7X3 1001 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms