RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ABCB6Q9NP58 842 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 LGALS16A8MUM7 142 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 LRG1P02750 347 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 CYP27A1Q02318 531 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 ORC1Q13415 861 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 PUS10Q3MIT2 529 aaKnown RBP16.95■□□□□ 0.3
PFDN4-201ENST00000371419 CFAP221Q4G0U5 840 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 ENOSF1Q7L5Y1 443 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 GPR149Q86SP6 731 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.95■□□□□ 0.3
PFDN4-201ENST00000371419 WHAMMQ8TF30 809 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 MYLPFQ96A32 169 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 JAKMIP2Q96AA8 810 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 ZNF707Q96C28 371 aaPredicted RBP16.95■□□□□ 0.3
PFDN4-201ENST00000371419 PCED1BQ96HM7 432 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 SEPT5Q99719 369 aaPredicted RBP16.95■□□□□ 0.3
PFDN4-201ENST00000371419 LPIN3Q9BQK8 851 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 RHOBTB2Q9BYZ6 727 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 UBE2TQ9NPD8 197 aaPredicted RBP16.95■□□□□ 0.3
PFDN4-201ENST00000371419 APEX2Q9UBZ4 518 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 YIPF1Q9Y548 306 aa16.95■□□□□ 0.3
PFDN4-201ENST00000371419 CCL16O15467 120 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 MBTPS2O43462 519 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 XYLBO75191 536 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 POU2F2P09086 479 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 HAPLN1P10915 354 aaPredicted RBP16.94■□□□□ 0.3
PFDN4-201ENST00000371419 ALDH1A3P47895 512 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 MRPS5P82675 430 aaKnown RBP16.94■□□□□ 0.3
PFDN4-201ENST00000371419 KCNMA1Q12791 1236 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 PLD1Q13393 1074 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 MGAT5BQ3V5L5 792 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 ATAT1Q5SQI0 421 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 UBR7Q8N806 425 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 SMG7Q92540 1137 aaKnown RBP16.94■□□□□ 0.3
PFDN4-201ENST00000371419 KAT5Q92993 513 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 RIPOR3Q96MK2 946 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 ELOVL4Q9GZR5 314 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 PIDD1Q9HB75 910 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 IMPACTQ9P2X3 320 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 FAM50BQ9Y247 325 aa16.94■□□□□ 0.3
PFDN4-201ENST00000371419 USP15Q9Y4E8 981 aaPredicted RBP16.94■□□□□ 0.3
PFDN4-201ENST00000371419 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 ACO1P21399 889 aaKnown RBP16.93■□□□□ 0.3
PFDN4-201ENST00000371419 CYP2F1P24903 491 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 MTHFRP42898 656 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 MAGEA11P43364 429 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 MFAP3P55082 362 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 FANCCQ00597 558 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 UBXN1Q04323 297 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 TWF1Q12792 350 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 FILIP1LQ4L180 1135 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
PFDN4-201ENST00000371419 CCDC186Q7Z3E2 898 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 SUSD6Q92537 303 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 TMEM176AQ96HP8 235 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 KREMEN1Q96MU8 473 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 SIX2Q9NPC8 291 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
PFDN4-201ENST00000371419 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 ATP8B3O60423 1300 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 SOAT2O75908 522 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 RAD23BP54727 409 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 EPHB3P54753 998 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 RPL10AP62906 217 aaKnown RBP16.93■□□□□ 0.3
PFDN4-201ENST00000371419 APBA1Q02410 837 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 VSTM1Q6UX27 236 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 ELMOD1Q8N336 334 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 C12orf29Q8N999 325 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 SLC4A11Q8NBS3 891 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 FEZF2Q8TBJ5 459 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 NECTIN4Q96NY8 510 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 LSM14BQ9BX40 385 aaKnown RBP16.93■□□□□ 0.3
PFDN4-201ENST00000371419 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 CDH22Q9UJ99 828 aa16.93■□□□□ 0.3
PFDN4-201ENST00000371419 SLC34A2O95436 690 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 SERPINC1P01008 464 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 BDNFP23560 247 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 GSDMDP57764 484 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 CBX2Q14781 532 aaPredicted RBP16.92■□□□□ 0.3
PFDN4-201ENST00000371419 DPY19L2P1Q6NXN4 242 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
PFDN4-201ENST00000371419 HEXIM2Q96MH2 286 aaKnown RBP16.92■□□□□ 0.3
PFDN4-201ENST00000371419 ASB2Q96Q27 587 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 MED10Q9BTT4 135 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 ZNF518BQ9C0D4 1074 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 XPO4Q9C0E2 1151 aaKnown RBP16.92■□□□□ 0.3
PFDN4-201ENST00000371419 PLCB1Q9NQ66 1216 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 ASB3Q9Y575 518 aa16.92■□□□□ 0.3
PFDN4-201ENST00000371419 UNC80Q8N2C7 3258 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 CLDN5O00501 218 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 CCDC130P13994 396 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms