RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 COL4A4P53420 1690 aaPredicted RBP18.71■□□□□ 0.59
VPS37B-202ENST00000371248 PTPRDP23468 1912 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 TEX28O15482 410 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 LPXNO60711 386 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 CNPP09543 421 aaKnown RBP18.7■□□□□ 0.58
VPS37B-202ENST00000371248 ROR1Q01973 937 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 CREMQ03060 361 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 GPR17Q13304 367 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
VPS37B-202ENST00000371248 MEA1Q16626 185 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 SLC2A14Q8TDB8 520 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 DDX1Q92499 740 aaKnown RBP18.7■□□□□ 0.58
VPS37B-202ENST00000371248 CHP1Q99653 195 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 B3GNT5Q9BYG0 378 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 BZW2Q9Y6E2 419 aaKnown RBP18.7■□□□□ 0.58
VPS37B-202ENST00000371248 C2orf71A6NGG8 1288 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 MED7O43513 233 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 CFHP08603 1231 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 ADORA2BP29275 332 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 CNGA2Q16280 664 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 ZNF571Q7Z3V5 609 aaPredicted RBP18.7■□□□□ 0.58
VPS37B-202ENST00000371248 MYLPFQ96A32 169 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 PGLYRP2Q96PD5 576 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 AGPAT1Q99943 283 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 MED10Q9BTT4 135 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 TSPAN16Q9UKR8 245 aa18.7■□□□□ 0.58
VPS37B-202ENST00000371248 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 O00370 1275 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 CLDN5O00501 218 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 SOX1O00570 391 aaPredicted RBP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 MMEP08473 750 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 NDUFV1P49821 464 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 CDR2Q01850 454 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 ARHGAP17Q68EM7 881 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 RNF19BQ6ZMZ0 732 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 ZNF677Q86XU0 584 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 FUKQ8N0W3 1084 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 KLHL5Q96PQ7 755 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 HNRNPABQ99729 332 aaKnown RBP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 EMILIN2Q9BXX0 1053 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 LMAN2LQ9H0V9 348 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 CHRNB2P17787 502 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 STILQ15468 1287 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 NFE2Q16621 373 aaPredicted RBP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 PDE12Q6L8Q7 609 aaKnown RBP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 C4orf50Q6ZRC1 276 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 PAQR9Q6ZVX9 377 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 PALB2Q86YC2 1186 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 SPATA2LQ8IUW3 424 aaPredicted RBP18.69■□□□□ 0.58
VPS37B-202ENST00000371248 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
VPS37B-202ENST00000371248 TNFAIP3P21580 790 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 EIF4A3P38919 411 aaKnown RBP18.68■□□□□ 0.58
VPS37B-202ENST00000371248 CDK17Q00537 523 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 FMO1Q01740 532 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 RAB33AQ14088 237 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 GOLGA7BQ2TAP0 167 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 LCLAT1Q6UWP7 414 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
VPS37B-202ENST00000371248 RHOBTB2Q9BYZ6 727 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 TTYH1Q9H313 450 aaPredicted RBP18.68■□□□□ 0.58
VPS37B-202ENST00000371248 SEPT11Q9NVA2 429 aaKnown RBP18.68■□□□□ 0.58
VPS37B-202ENST00000371248 ABI2Q9NYB9 513 aaPredicted RBP18.68■□□□□ 0.58
VPS37B-202ENST00000371248 PCDHB5Q9Y5E4 795 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 PLXNA3P51805 1871 aa18.68■□□□□ 0.58
VPS37B-202ENST00000371248 MTMR11A4FU01 709 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 MICAL2O94851 1124 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 ADH1AP07327 375 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 KLRC2P26717 231 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 PASD1Q8IV76 773 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 UBA3Q8TBC4 463 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 LRCH3Q96II8 777 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 SYT11Q9BT88 431 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.67■□□□□ 0.58
VPS37B-202ENST00000371248 ZNF518BQ9C0D4 1074 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
VPS37B-202ENST00000371248 HESX1Q9UBX0 185 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 PCDHGC3Q9UN70 934 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 M0QYV0 167 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 ABLIM3O94929 683 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 BDNFP23560 247 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 SMARCB1Q12824 385 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 CYP26C1Q6V0L0 522 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 FAM35AQ86V20 835 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 ATAD1Q8NBU5 361 aa18.67■□□□□ 0.58
VPS37B-202ENST00000371248 MTCL1Q9Y4B5 1905 aaKnown RBP18.66■□□□□ 0.58
VPS37B-202ENST00000371248 TMEM265A0A087WTH1 108 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 FECHP22830 423 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 CYP2F1P24903 491 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 PTPROQ16827 1216 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 TPGS2Q68CL5 300 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 DENND1BQ6P3S1 775 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 TMTC1Q8IUR5 882 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 TMEM139Q8IV31 216 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 ANKRD52Q8NB46 1076 aa18.66■□□□□ 0.58
VPS37B-202ENST00000371248 CCDC42Q96M95 316 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms