RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 TDP1Q9NUW8 608 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
VMA21-202ENST00000370361 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
VMA21-202ENST00000370361 SLC38A8A6NNN8 435 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
VMA21-202ENST00000370361 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
VMA21-202ENST00000370361 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 F13A1P00488 732 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 TDGF1P13385 188 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 HOXA6P31267 233 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 ME1P48163 572 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 PSMD6Q15008 389 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 PDGFRLQ15198 375 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 KIAA1958Q8N8K9 716 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 XXYLT1Q8NBI6 393 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 SPATA17Q96L03 361 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 CGRRF1Q99675 332 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 USP25Q9UHP3 1055 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 GMEB2Q9UKD1 530 aa17.29■□□□□ 0.36
VMA21-202ENST00000370361 TACC1O75410 805 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 STAU1O95793 577 aaKnown RBP17.28■□□□□ 0.36
VMA21-202ENST00000370361 MYL1P05976 194 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 WARSP23381 471 aaKnown RBP17.28■□□□□ 0.36
VMA21-202ENST00000370361 ATICP31939 592 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 PPP3CCP48454 512 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 AP3M2P53677 418 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 MAB21L3Q8N8X9 362 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 TMEM174Q8WUU8 243 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 LRRC3BQ96PB8 259 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 GTSE1Q9NYZ3 720 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 MAGEC2Q9UBF1 373 aaPredicted RBP17.28■□□□□ 0.36
VMA21-202ENST00000370361 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
VMA21-202ENST00000370361 TRAV19A0A0A6YYK7 116 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 TRIM66O15016 1216 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 TGFB1I1O43294 461 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 LRP3O75074 770 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 ATG13O75143 517 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 USP17L7P0C7H9 530 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 TCF3P15923 654 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 TNNI1P19237 187 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 CYP2F1P24903 491 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 HOXD13P35453 343 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 CYP24A1Q07973 514 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 GRSF1Q12849 480 aaKnown RBP eCLIP17.27■□□□□ 0.36
VMA21-202ENST00000370361 RUNX3Q13761 415 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 CCINQ13939 588 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.36
VMA21-202ENST00000370361 OR5B17Q8NGF7 314 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 CCDC26Q8TAB7 109 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 SCFD1Q8WVM8 642 aa17.27■□□□□ 0.36
VMA21-202ENST00000370361 USP13Q92995 863 aaPredicted RBP17.27■□□□□ 0.36
VMA21-202ENST00000370361 MAGED2Q9UNF1 606 aaPredicted RBP17.27■□□□□ 0.36
VMA21-202ENST00000370361 OBSL1O75147 1896 aa17.27■□□□□ 0.35
VMA21-202ENST00000370361 ZNF638Q14966 1978 aaKnown RBP17.26■□□□□ 0.35
VMA21-202ENST00000370361 PRR5-ARHGAP8B1AHC4 643 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 FOXD2O60548 495 aaPredicted RBP17.26■□□□□ 0.35
VMA21-202ENST00000370361 ACAT1P24752 427 aaKnown RBP17.26■□□□□ 0.35
VMA21-202ENST00000370361 ANXA13P27216 316 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 TNNC1P63316 161 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 LMNB2Q03252 620 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 PSMD2Q13200 908 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 DDR2Q16832 855 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
VMA21-202ENST00000370361 LAIR1Q6GTX8 287 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 OSTM1Q86WC4 334 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 KIAA2013Q8IYS2 634 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 CPA6Q8N4T0 437 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 GLIS3Q8NEA6 775 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 MYCBPAPQ8TBZ2 947 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
VMA21-202ENST00000370361 ZFYVE19Q96K21 471 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 MMS19Q96T76 1030 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 SNX25Q9H3E2 840 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 GKN1Q9NS71 199 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
VMA21-202ENST00000370361 PTPRJQ12913 1337 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 CCDC163A0A0D9SF12 145 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 TRDMT1O14717 391 aaKnown RBP17.25■□□□□ 0.35
VMA21-202ENST00000370361 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 DLATP10515 647 aaKnown RBP17.25■□□□□ 0.35
VMA21-202ENST00000370361 TRPC3Q13507 836 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 FBXO43Q4G163 708 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 TMEM196Q5HYL7 178 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 TXNDC8Q6A555 127 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 TSSK4Q6SA08 328 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 SCN4BQ8IWT1 228 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 KBTBD7Q8WVZ9 684 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms