RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ZBTB39O15060 712 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 STX7O15400 261 aaKnown RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 PNPLA4P41247 253 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 NME5P56597 212 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 NAA30Q147X3 362 aaPredicted RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF669Q96BR6 464 aaPredicted RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 SNTG2Q9NY99 539 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 KCND2Q9NZV8 630 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 A0A1W2PQC6 194 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 TARSL2A2RTX5 802 aaKnown RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 SGPL1O95470 568 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 THP07101 528 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 PCNAP12004 261 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 DARSP14868 501 aaKnown RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 CUL2Q13617 745 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 MAPRE2Q15555 327 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 GALNTL6Q49A17 601 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 ADSSL1Q8N142 457 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 CLEC4FQ8N1N0 589 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 FEZF2Q8TBJ5 459 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 GPRASP2Q96D09 838 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 MTA3Q9BTC8 594 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 FAM129AQ9BZQ8 928 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 STN1Q9H668 368 aaKnown RBP8.9□□□□□ -0.99
ABCA4-201ENST00000370225 PXMP2Q9NR77 195 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 A0A087WZ62 844 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 DTX3LQ8TDB6 740 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PHF21AQ96BD5 680 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 WNK4Q96J92 1243 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ATP6V1G3Q96LB4 118 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 RIT2Q99578 217 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 FDXACB1Q9BRP7 624 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 GUCA1CO95843 209 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 FGFR1P11362 822 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 GRIN1Q05586 938 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 CCDC15Q0P6D6 951 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 STX3Q13277 289 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 HORMAD1Q86X24 394 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PCSK9Q8NBP7 692 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 SENP6Q9GZR1 1112 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF556Q9HAH1 456 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PSD3Q9NYI0 1048 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 UVRAGQ9P2Y5 699 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 C2orf81A6NN90 581 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 A8MX80 341 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 AP3B1O00203 1094 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MAFGO15525 162 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 CLASP2O75122 1294 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 OSBPL8Q9BZF1 889 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 H2AFY2Q9P0M6 372 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 IPPQ9Y573 584 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PCDHB2Q9Y5E7 798 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 EIF3DO15371 548 aaKnown RBP eCLIP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MLNP12872 115 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ALOX15P16050 662 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ITGB6P18564 788 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 RPA1P27694 616 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 HIST2H2ACQ16777 129 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 HIST2H2AA3Q6FI13 130 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 INPP5DQ92835 1189 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 UNKQ9C0B0 810 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 NDE1Q9NXR1 346 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 TRMT6Q9UJA5 497 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 RNF112Q9ULX5 631 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 TAF6LQ9Y6J9 622 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MED24O75448 989 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ALDH2P05091 517 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 SUPT20HL2P0C7V6 817 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 SRGNP10124 158 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ERVK-10P10266 1014 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 HIC1Q14526 733 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF555Q8NEP9 628 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 UCMAQ8WVF2 138 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PLEKHA8Q96JA3 519 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 SMPD4Q9NXE4 827 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 UBXN8O00124 270 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 CCDC22O60826 627 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 H2AFYO75367 372 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 SERPINI2O75830 405 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 RHOBTB3O94955 611 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PGM1P36871 562 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ITGA8P53708 1063 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ABCE1P61221 599 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 STAT4Q14765 748 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MAPRE1Q15691 268 aaKnown RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 PTGISQ16647 500 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ALFQ53S48 1182 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
ABCA4-201ENST00000370225 MFSD1Q9H3U5 465 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 ZSCAN32Q9NX65 697 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 GTF2A1LQ9UNN4 478 aa8.89□□□□□ -0.99
ABCA4-201ENST00000370225 DDTLA6NHG4 134 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TRIM16O95361 564 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 GHRP10912 638 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms