RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RBM10P98175 930 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 MYO7AQ13402 2215 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 ORC1Q13415 861 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 RAPGEF1Q13905 1077 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 PPM1LQ5SGD2 360 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 HLA-CQ95604 372 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 RHOBTB2Q9BYZ6 727 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 CLEC1BQ9P126 229 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 CEP72Q9P209 647 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 INSL5Q9Y5Q6 135 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 PLXNA3P51805 1871 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 TBX10O75333 385 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 VDRP11473 427 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 LTBRP36941 435 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 PBX1P40424 430 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 DRAP1Q14919 205 aaPredicted RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 FIGNQ5HY92 759 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 ARHGAP17Q68EM7 881 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 EP400NLQ6ZTU2 488 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 FMNL3Q8IVF7 1028 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 C12orf29Q8N999 325 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 CYFIP2Q96F07 1278 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 CEP295NLQ96MC4 621 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 SPAG5Q96R06 1193 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 HNRNPABQ99729 332 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 B3GNT5Q9BYG0 378 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
PRPF38B-202ENST00000370022 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 F8VZ95 297 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 EPHB6O15197 1021 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 LRG1P02750 347 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 BPIFB4P59827 614 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 PLCB2Q00722 1185 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 ITIH3Q06033 890 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 STILQ15468 1287 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 SGO2Q562F6 1265 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 FAM71AQ8IYT1 594 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 FUKQ8N0W3 1084 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 MSLNLQ96KJ4 702 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 MED10Q9BTT4 135 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 GPR88Q9GZN0 384 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 CRISPLD1Q9H336 500 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 AJAP1Q9UKB5 411 aaPredicted RBP16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 SLC27A5Q9Y2P5 690 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
PRPF38B-202ENST00000370022 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 TRIM66O15016 1216 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 XYLBO75191 536 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 CD19P15391 556 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 BDNFP23560 247 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 CYP2F1P24903 491 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 USP8P40818 1118 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 JAM2P57087 298 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 PTK2Q05397 1052 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 FAM35AQ86V20 835 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 ELMOD1Q8N336 334 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 LPIN3Q9BQK8 851 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 PRKD2Q9BZL6 878 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
PRPF38B-202ENST00000370022 MTCL1Q9Y4B5 1905 aaKnown RBP16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 CCDC195A0A1B0GUA6 201 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 MED7O43513 233 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 RFPL2O75678 378 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 CCDC130P13994 396 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 STAT1P42224 750 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 EPHB3P54753 998 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 DLX2Q07687 328 aaPredicted RBP16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 TWF1Q12792 350 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 VEPH1Q14D04 833 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 PPP1R26Q5T8A7 1209 aaPredicted RBP16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 CES5AQ6NT32 575 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 SYCE2Q6PIF2 218 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 C8orf48Q96LL4 319 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
PRPF38B-202ENST00000370022 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■□□□□ 10.1
PRPF38B-202ENST00000370022 A0A1W2PQJ5 194 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CLDN5O00501 218 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 KCNA5P22460 613 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 ANXA13P27216 316 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 GNA15P30679 374 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 SOX5P35711 763 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms