RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 IKBKEQ14164 716 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 CNKSR3Q6P9H4 555 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 SLC2A14Q8TDB8 520 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 IPO4Q8TEX9 1081 aaKnown RBP20.55■□□□□ 0.88
CHTOP-204ENST00000368694 RSPH1Q8WYR4 309 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 HES6Q96HZ4 224 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 CASD1Q96PB1 797 aa20.55■□□□□ 0.88
CHTOP-204ENST00000368694 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
CHTOP-204ENST00000368694 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.55■□□□□ 0.88
CHTOP-204ENST00000368694 PRG3Q9Y2Y8 225 aaPredicted RBP20.55■□□□□ 0.88
CHTOP-204ENST00000368694 V9GYY5 206 aaPredicted RBP20.55■□□□□ 0.88
CHTOP-204ENST00000368694 GOLGA8SH3BPF8 625 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 ERBB2P04626 1255 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 PFKMP08237 780 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 PTPN1P18031 435 aaKnown RBP20.54■□□□□ 0.88
CHTOP-204ENST00000368694 CKAP4Q07065 602 aaKnown RBP20.54■□□□□ 0.88
CHTOP-204ENST00000368694 DCUN1D2Q6PH85 259 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 CD300LGQ6UXG3 332 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 NPAS4Q8IUM7 802 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 C3orf20Q8ND61 904 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 MCEEQ96PE7 176 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 DSEQ9UL01 958 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 FNDC1Q4ZHG4 1894 aaPredicted RBP20.54■□□□□ 0.88
CHTOP-204ENST00000368694 RFC2P35250 354 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 BCAT1P54687 386 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 FEZF2Q8TBJ5 459 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 SYT15Q9BQS2 421 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 SELENOOQ9BVL4 669 aa20.54■□□□□ 0.88
CHTOP-204ENST00000368694 ARHGEF37A1IGU5 675 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CTAGE15A4D2H0 777 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 M0QZQ0 153 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 PIK3R2O00459 728 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 UPP2O95045 317 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CTAGE8P0CG41 777 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 RGS7P49802 495 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 RPL7AP62424 266 aaKnown RBP20.53■□□□□ 0.88
CHTOP-204ENST00000368694 BST2Q10589 180 aaKnown RBP20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CCDC142Q17RM4 750 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 PKDCCQ504Y2 493 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 MDH1BQ5I0G3 518 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CTAGE6Q86UF2 777 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CREG2Q8IUH2 290 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 CTAGE4Q8IX94 777 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 ANKRD52Q8NB46 1076 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 SUSD3Q96L08 255 aa20.53■□□□□ 0.88
CHTOP-204ENST00000368694 TBKBP1A7MCY6 615 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 TULP2O00295 520 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 TIMP1P01033 207 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 RAG1P15918 1043 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 CAPN2P17655 700 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 PCSK1P29120 753 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 CDR1P51861 262 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 PDE4CQ08493 712 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.52■□□□□ 0.88
CHTOP-204ENST00000368694 XYLT1Q86Y38 959 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 MED10Q9BTT4 135 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 MCOLN1Q9GZU1 580 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 MIS12Q9H081 205 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 WDR35Q9P2L0 1181 aa20.52■□□□□ 0.88
CHTOP-204ENST00000368694 TRIM43BA6NCK2 446 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 E5RJQ4 531 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 SETSIPP0DME0 302 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 TKTP29401 623 aaKnown RBP20.52■□□□□ 0.87
CHTOP-204ENST00000368694 PAFAH1B1P43034 410 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 GABRB2P47870 512 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 TAP1Q03518 808 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 KIAA0319Q5VV43 1072 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 PMF1Q6P1K2 205 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 CRIPAKQ8N1N5 446 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 UBL4BQ8N7F7 174 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 TRIM43Q96BQ3 446 aaPredicted RBP20.52■□□□□ 0.87
CHTOP-204ENST00000368694 MS4A14Q96JA4 679 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 MRPL9Q9BYD2 267 aaKnown RBP20.52■□□□□ 0.87
CHTOP-204ENST00000368694 NRDE2Q9H7Z3 1164 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 CDH9Q9ULB4 789 aa20.52■□□□□ 0.87
CHTOP-204ENST00000368694 TCRBV5S1A1TA0A578 114 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 EFCAB8A8MWE9 144 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 MIF4GDA9UHW6 222 aaKnown RBP20.51■□□□□ 0.87
CHTOP-204ENST00000368694 CLDN5O00501 218 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 TADA3O75528 432 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 CYP11A1P05108 521 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 ITGB8P26012 769 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 OVOS1Q6IE37 1185 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 CPNE8Q86YQ8 564 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 SLC35F5Q8WV83 523 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 CRTAC1Q9NQ79 661 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
CHTOP-204ENST00000368694 TMEM189-UBE2V1I3L0A0 370 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 TADA2AO75478 443 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 KRT3P12035 628 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 CSF2RAP15509 400 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 GSCP56915 257 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 SLC8A3P57103 927 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 ZNF268Q14587 947 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 CFAP221Q4G0U5 840 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 FUKQ8N0W3 1084 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 SPATA18Q8TC71 538 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 PBKQ96KB5 322 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms