RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 UXTQ9UBK9 157 aaPredicted RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 PTPRDP23468 1912 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 OTOL1A6NHN0 477 aaPredicted RBP17.19■□□□□ 0.34
CKS1B-202ENST00000368436 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
CKS1B-202ENST00000368436 STX6O43752 255 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 LRP3O75074 770 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 TADA3O75528 432 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 KRT19P08727 400 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 HOXD13P35453 343 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 SPEM2Q0P670 501 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 E2F4Q16254 413 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 SOWAHAQ2M3V2 549 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 TMEM196Q5HYL7 178 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 FAM171BQ6P995 826 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 PRR23BQ6ZRT6 265 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 ADGRF2Q8IZF7 708 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 GLIS3Q8NEA6 775 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 FUBP3Q96I24 572 aaKnown RBP eCLIP17.19■□□□□ 0.34
CKS1B-202ENST00000368436 LRRC27Q9C0I9 530 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 EBF3Q9H4W6 596 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 KBTBD4Q9NVX7 518 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 PTPRJQ12913 1337 aa17.19■□□□□ 0.34
CKS1B-202ENST00000368436 HELZP42694 1942 aaKnown RBP17.18■□□□□ 0.34
CKS1B-202ENST00000368436 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 TRDMT1O14717 391 aaKnown RBP17.18■□□□□ 0.34
CKS1B-202ENST00000368436 HCRTO43612 131 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 PCSK1P29120 753 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 HOXC13P31276 330 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 SRSF5Q13243 272 aaKnown RBP17.18■□□□□ 0.34
CKS1B-202ENST00000368436 STK38Q15208 465 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 SURF1Q15526 300 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 TRIM68Q6AZZ1 485 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 FSTL4Q6MZW2 842 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 STXBP4Q6ZWJ1 553 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 WDR5BQ86VZ2 330 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 HPS3Q969F9 1004 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 ANKRD36BP1Q96IX9 119 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 CUEDC2Q9H467 287 aa17.18■□□□□ 0.34
CKS1B-202ENST00000368436 ATG2BQ96BY7 2078 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 PPP6R2O75170 966 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 MAGEA11P43364 429 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 MYO1EQ12965 1108 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 PDGFRLQ15198 375 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 CCDC142Q17RM4 750 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 DUOXA2Q1HG44 320 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 LMBRD2Q68DH5 695 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 HEATR6Q6AI08 1181 aaKnown RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 PKN3Q6P5Z2 889 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 EPM2AIP1Q7L775 607 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 CBWD2Q8IUF1 395 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 SPATA2LQ8IUW3 424 aaPredicted RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 KBTBD7Q8WVZ9 684 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 HPDLQ96IR7 371 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 RTKNQ9BST9 563 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 TRIM9Q9C026 710 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 KIAA1586Q9HCI6 787 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 CDV3Q9UKY7 258 aaKnown RBP17.17■□□□□ 0.34
CKS1B-202ENST00000368436 EML5Q05BV3 1969 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
CKS1B-202ENST00000368436 MYO16Q9Y6X6 1858 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
CKS1B-202ENST00000368436 SPTLC2O15270 562 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 EIF3DO15371 548 aaKnown RBP eCLIP17.16■□□□□ 0.34
CKS1B-202ENST00000368436 ATP2C2O75185 946 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 TNNC2P02585 160 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 ARSAP15289 507 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 LMO2P25791 158 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 AMPD2Q01433 879 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 FAM160A1Q05DH4 1040 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 GRSF1Q12849 480 aaKnown RBP eCLIP17.16■□□□□ 0.34
CKS1B-202ENST00000368436 CSRP2Q16527 193 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 CC2D1AQ6P1N0 951 aaPredicted RBP17.16■□□□□ 0.34
CKS1B-202ENST00000368436 WDR49Q8IV35 697 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 SLC22A12Q96S37 553 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 FBRSL1Q9HCM7 1045 aaKnown RBP17.16■□□□□ 0.34
CKS1B-202ENST00000368436 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 GCNT4Q9P109 453 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 CDH9Q9ULB4 789 aa17.16■□□□□ 0.34
CKS1B-202ENST00000368436 CCDC163A0A0D9SF12 145 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 ATG13O75143 517 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 USP17L7P0C7H9 530 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 WARSP23381 471 aaKnown RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 GALK1P51570 392 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 AMPD3Q01432 767 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 MTF1Q14872 753 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 ZNF77Q15935 545 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 VSTM1Q6UX27 236 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms