RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 COL4A3BPQ9Y5P4 624 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 NR2E3Q9Y5X4 410 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 RAD54BQ9Y620 910 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 SHANK2Q9UPX8 1470 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 WDR90Q96KV7 1748 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 MAP3K4Q9Y6R4 1608 aa2.17□□□□□ -2.06
RNU4-41P-201ENST00000364426 IFT140Q96RY7 1462 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 ANKRD62A6NC57 917 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 H0YIZ8 118 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 SLC16A3O15427 465 aaKnown RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 KATNA1O75449 491 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 SNUPNO95149 360 aaKnown RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 ZRANB2O95218 330 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 IGKV2-30P06310 120 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 NHLRC4P0CG21 123 aaPredicted RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 SMARCA1P28370 1054 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 PPIFP30405 207 aaKnown RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 GCLCP48506 637 aaPredicted RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 ALDH9A1P49189 494 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 CDKN1CP49918 316 aaPredicted RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 HK3P52790 923 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 EVA1CP58658 441 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 NOGQ13253 232 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 LAMB3Q13751 1172 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 KLF9Q13886 244 aaPredicted RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 PTPN21Q16825 1174 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 PTPROQ16827 1216 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 UAP1L1Q3KQV9 507 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 EMC10Q5UCC4 262 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 VPS53Q5VIR6 699 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 FAM160B1Q5W0V3 765 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 ICE2Q659A1 982 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 SLC9A4Q6AI14 798 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 SLC29A4Q7RTT9 530 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 USP37Q86T82 979 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 KRT73Q86Y46 540 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 MIER2Q8N344 545 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 PRR18Q8N4B5 295 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 C1orf43Q9BWL3 253 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 BRINP2Q9C0B6 783 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 CCDC8Q9H0W5 538 aaPredicted RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 MRPL46Q9H2W6 279 aaKnown RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 HOMER2Q9NSB8 354 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 DLL3Q9NYJ7 618 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 HESX1Q9UBX0 185 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 XIRP1Q702N8 1843 aaKnown RBP2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
RNU4-41P-201ENST00000364426 TTC37Q6PGP7 1564 aa2.15□□□□□ -2.06
RNU4-41P-201ENST00000364426 VWDEQ8N2E2 1590 aa2.15□□□□□ -2.06
RNU4-41P-201ENST00000364426 CYP2D7A0A087X1C5 515 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 PRRT4C9JH25 899 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 H7C1Q1 480 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 IKBKBO14920 756 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 KIF20AO95235 890 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 BMP15O95972 392 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 TOP3BO95985 862 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 GNAI2P04899 355 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ATXN1LP0C7T5 689 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 HOXB6P17509 224 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 SFPQP23246 707 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 RECQLP46063 649 aaPredicted RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 EEFSECP57772 596 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 LOXL3P58215 753 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ANAPC15P60006 121 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 BOP1Q14137 746 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ODF1Q14990 250 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ETFDHQ16134 617 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 PRAMEF17Q5VTA0 474 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 SLC18B1Q6NT16 456 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 MTHFD1LQ6UB35 978 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 CATSPERGQ6ZRH7 1159 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 MAVSQ7Z434 540 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 YTHDF3Q7Z739 585 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 GALNT16Q8N428 558 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 DNAJC5GQ8N7S2 189 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 RP9Q8TA86 221 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 SMAD5Q99717 465 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 THAP7Q9BT49 309 aaPredicted RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 FSD1LQ9BXM9 530 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 PRSS22Q9GZN4 317 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 DUSP22Q9NRW4 184 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 SH3BP4Q9P0V3 963 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 FEZ2Q9UHY8 353 aaPredicted RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 TBC1D30Q9Y2I9 924 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 NOP58Q9Y2X3 529 aaKnown RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ADCY10Q96PN6 1610 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 CACNA1GO43497 2377 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 TNKSO95271 1327 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ZNF521Q96K83 1311 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 ZNF335Q9H4Z2 1342 aaPredicted RBP2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 CEP170Q5SW79 1584 aa2.15□□□□□ -2.07
RNU4-41P-201ENST00000364426 TOPBP1Q92547 1522 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 hCG_2014768A0A024R1R8 64 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 LRRC14BA6NHZ5 514 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 QSOX1O00391 747 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 TRIM38O00635 465 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 PPEF2O14830 753 aa2.14□□□□□ -2.07
RNU4-41P-201ENST00000364426 DCLK1O15075 740 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms